Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing

Orsi William D.; Wilken Susanne; del Campo Javier; Heger Thierry; James Erick; Richards Thomas A.; Keeling Patrick J.; Worden Alexandra Z.; Santoro Alyson E.

摘要

Summary > Photosynthetic picoeukaryotes contribute a significant fraction of primary production in the upper ocean. Micromonas pusilla is an ecologically relevant photosynthetic picoeukaryote, abundantly and widely distributed in marine waters. Grazing by protists may control the abundance of picoeukaryotes such as M. pusilla , but the diversity of the responsible grazers is poorly understood. To identify protists consuming photosynthetic picoeukaryotes in a productive North Pacific Ocean region, we amended seawater with living 15 N, 13 C‐labelled M. pusilla cells in a 24‐h replicated bottle experiment. DNA stable isotope probing, combined with high‐throughput sequencing of V4 hypervariable regions from 18S rRNA gene amplicons (Tag‐SIP), identified 19 operational taxonomic units (OTUs) of microbial eukaryotes that consumed M. pusilla . These OTUs were distantly related to cultured taxa within the dinoflagellates, ciliates, stramenopiles (MAST‐1C and MAST‐3 clades) and Telonema flagellates, thus, far known only from their environmental 18S rRNA gene sequences. Our discovery of eukaryotic prey consumption by MAST cells confirms that their trophic role in marine microbial food webs includes grazing upon picoeukaryotes. Our study provides new experimental evidence directly linking the genetic identity of diverse uncultivated microbial eukaryotes to the consumption of picoeukaryotic phytoplankton in the upper ocean. </abstract> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> <div class="translation abstracttxt"> <span class="zhankaihshouqi fivelineshidden" id="abstract"> <span>机译：</span><abstract xmlns =“http://www.wiley.com/namespaces/wiley”type =“main”xml：lang =“en”> <title type =“main”>摘要</ title> > photosyhetic picoukaryotes有助于上海的大量初级生产。 Micromonas pusilla </ i>是一种生态相关的光合核节，大量和广泛分布在海水中。由原国放牧可以控制诸如 m的丰富核核糖。 Pusilla </ i>，但负责的食草剂的多样性明白很差。为了识别消耗Photyhetic Picoukarytes在生产北太平洋地区的Picohookarytes的保护，我们将海水与Live 15 </ sup> n， 13 </ sup> c标记的 m进行了修订。 Pusilla </ i>在24小时复制瓶实验中的细胞。 DNA稳定的同位素探测，结合从18S rRNA基因扩增子（Tag-SIP）的V4高变区的高通量测序，确定的19个运营分类单位（OTU）的微生物真核生物，消耗 m。 pusilla </ i>。这些OTU与甲藻素，纤毛素，酸蛋白缺口（乳腺-1C和MAST-3片材）和 Telonema（粪便液）和鞭毛的培养的素有关，因此，仅仅从它们的环境18s rRNA基因序列中已知。我们发现肥大细胞的真核饲料消耗证实，他们在海洋微生物食品网中的营养型作用包括在Picookaryot上放牧。我们的研究提供了新的实验证据，直接将各种未露天的微生物真核生物的遗传标识与上海的Picoeuckary Phytoplankton消耗联系起来。 </ p> </ abstract> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> </div> <div class="record"> <h2 class="all_title" id="enpatent33" >著录项</h2> <ul> <li> <span class="lefttit">来源</span> <div style="width: 86%;vertical-align: text-top;display: inline-block;"> <a href='/journal-foreign-22868/'>《Environmental microbiology》</a> <b style="margin: 0 2px;">|</b><span>2018年第2期</span><b style="margin: 0 2px;">|</b><span>共13页</span> </div> </li> <li> <div class="author"> <span class="lefttit">作者</span> <p id="fAuthorthree" class="threelineshidden zhankaihshouqi"> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Orsi William D.&option=202" target="_blank" rel="nofollow">Orsi William D.;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Wilken Susanne&option=202" target="_blank" rel="nofollow">Wilken Susanne;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=del Campo Javier&option=202" target="_blank" rel="nofollow">del Campo Javier;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Heger Thierry&option=202" target="_blank" rel="nofollow">Heger Thierry;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=James Erick&option=202" target="_blank" rel="nofollow">James Erick;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Richards Thomas A.&option=202" target="_blank" rel="nofollow">Richards Thomas A.;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Keeling Patrick J.&option=202" target="_blank" rel="nofollow">Keeling Patrick J.;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Worden Alexandra Z.&option=202" target="_blank" rel="nofollow">Worden Alexandra Z.;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Santoro Alyson E.&option=202" target="_blank" rel="nofollow">Santoro Alyson E.;</a> </p> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zkzz" style="display: none;">展开▼</span> </div> </li> <li> <div style="display: flex;"> <span class="lefttit">作者单位</span> <div style="position: relative;margin-left: 3px;max-width: 639px;"> <div class="threelineshidden zhankaihshouqi" id="fOrgthree"> <p>Horn Point LaboratoryUniversity of Maryland Center for Environmental ScienceCambridge MD 21613 USA;</p> <p>Monterey Bay Aquarium Research InstituteMoss Landing CA 95039 USA;</p> <p>Department of BotanyUniversity of British ColumbiaVancouver British Columbia Canada;</p> <p>Department of BotanyUniversity of British ColumbiaVancouver British Columbia Canada;</p> <p>Department of BotanyUniversity of British ColumbiaVancouver British Columbia Canada;</p> <p>Department of BiosciencesUniversity of Exeter Geoffrey Pope BuildingExeter EX4 4QD UK;</p> <p>Department of BotanyUniversity of British ColumbiaVancouver British Columbia Canada;</p> <p>Monterey Bay Aquarium Research InstituteMoss Landing CA 95039 USA;</p> <p>Horn Point LaboratoryUniversity of Maryland Center for Environmental ScienceCambridge MD 21613 USA;</p> </div> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zhdw" style="display: none;">展开▼</span> </div> </div> </li> <li > <span class="lefttit">收录信息</span> <span style="width: 86%;vertical-align: text-top;display: inline-block;"></span> </li> <li> <span class="lefttit">原文格式</span> <span>PDF</span> </li> <li> <span class="lefttit">正文语种</span> <span>eng</span> </li> <li> <span class="lefttit">中图分类</span> <span><a href="https://www.zhangqiaokeyan.com/clc/183.html" title="微生物学">微生物学;</a></span> </li> <li class="antistop"> <span class="lefttit">关键词</span> <p style="width: 86%;vertical-align: text-top;"> </p> </li> </ul> </div> </div> <div class="literature cardcommon"> <div class="similarity "> <h3 class="all_title" id="enpatent66">相似文献</h3> <div class="similaritytab clearfix"> <ul> <li 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