The virome of the arbuscular mycorrhizal fungus        <i xmlns='http://www.wiley.com/namespaces/wiley'>Gigaspora margaritaGigaspora margarita        reveals the first report of DNA fragments corresponding to replicating non‐retroviral RNA viruses in fungi

Turina Massimo; Ghignone Stefano; Astolfi Nausicaa; Silvestri Alessandro; Bonfante Paola; Lanfranco Luisa

摘要

Summary > Arbuscular Mycorrhizal Fungi (AMF) are key components of the plant microbiota. AMF genetic complexity is increased by the presence of endobacteria, which live inside many species. A further component of such complexity is the virome associated to AMF, whose knowledge is still very limited. Here, by exploiting transcriptomic data we describe the virome of Gigaspora margarita . A BLAST search for viral RNA‐dependent RNA polymerases sequences allowed the identification of four mitoviruses, one Ourmia‐like narnavirus, one Giardia‐like virus, and two sequences related to Fusarium graminearum mycoviruses. Northern blot and RT‐PCR confirmed the authenticity of all the sequences with the exception of the F. graminearum ‐related ones. All the mitoviruses are replicative and functional since both positive strand and negative strand RNA are present. The abundance of the viral RNA molecules is not regulated by the presence or absence of Candidatus Glomeribacter gigasporarum, the endobacterium hosted by G. margarita , with the exception of the Ourmia‐like sequence which is absent in bacteria‐cured spores. In addition, we report, for the first time, DNA fragments corresponding to mitovirus sequences associated to the presence of viral RNA. These sequences are not integrated in the mitochondrial DNA and preliminary evidence seems to exclude integration in the nuclear genome. </abstract> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> <div class="translation abstracttxt"> <span class="zhankaihshouqi fivelineshidden" id="abstract"> <span>机译：</span><abstract xmlns =“http://www.wiley.com/namespaces/wiley”type =“main”xml：lang =“en”> <title type =“main”>摘要</ title> > asbuscully mycorrhizal真菌（AMF）是植物微生物群的关键组成部分。 AMF遗传复杂性通过肢体的存在而增加，其存在于许多物种内。这种复杂性的另一个组分是与AMF相关的病毒体，其知识仍然非常有限。在这里，通过利用转录组数据，我们描述了 Gigaspora Margarita </ i>的生物体。爆炸搜索病毒RNA依赖性RNA聚合酶序列允许鉴定四种培养虫病毒，一种类似瘤瘤的肿瘤，一种类似糖尿病的病毒，以及与镰刀菌的两种序列有关，以及镰刀菌病毒的两个序列。 Northern印迹和RT-PCR确认了所有序列的真实性，除了 f外。 Graminearum </ i> - 相关的。所有培养管血管病毒都是复制的，功能性，因为存在正链和阴茎RNA。病毒RNA分子的丰度不受 Candidatus的存在或不存在的肾小球杆菌的存在或不存在，所述植入杆菌患者通过 g托管。 Margarita </ I>除了尿道般的孢子中不存在的血管序列。此外，我们首次报告对应于与病毒RNA存在相关的Mitovirus序列的DNA片段。这些序列未纳入线粒体DNA，初步证据似乎排除在核基因组中的整合。 </ p> </ abstract> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> </div> <div class="record"> <h2 class="all_title" id="enpatent33" >著录项</h2> <ul> <li> <span class="lefttit">来源</span> <div style="width: 86%;vertical-align: text-top;display: inline-block;"> <a href='/journal-foreign-22868/'>《Environmental microbiology》</a> <b style="margin: 0 2px;">|</b><span>2018年第6期</span><b style="margin: 0 2px;">|</b><span>共14页</span> </div> </li> <li> <div class="author"> <span class="lefttit">作者</span> <p id="fAuthorthree" class="threelineshidden zhankaihshouqi"> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Turina Massimo&option=202" target="_blank" rel="nofollow">Turina Massimo;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Ghignone Stefano&option=202" target="_blank" rel="nofollow">Ghignone Stefano;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Astolfi Nausicaa&option=202" target="_blank" rel="nofollow">Astolfi Nausicaa;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Silvestri Alessandro&option=202" target="_blank" rel="nofollow">Silvestri Alessandro;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Bonfante Paola&option=202" target="_blank" rel="nofollow">Bonfante Paola;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Lanfranco Luisa&option=202" target="_blank" rel="nofollow">Lanfranco Luisa;</a> </p> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zkzz" style="display: none;">展开▼</span> </div> </li> <li> <div style="display: flex;"> <span class="lefttit">作者单位</span> <div style="position: relative;margin-left: 3px;max-width: 639px;"> <div class="threelineshidden zhankaihshouqi" id="fOrgthree"> <p>Institute for Sustainable Plant Protection – CNR Torino Strada delle Cacce 7310131 Torino Italy;</p> <p>Institute for Sustainable Plant Protection – CNR Torino Strada delle Cacce 7310131 Torino Italy;</p> <p>Department of Life Sciences and Systems BiologyUniversity of Torino Viale P.A. Mattioli 2510125 Torino Italy;</p> <p>Department of Life Sciences and Systems BiologyUniversity of Torino Viale P.A. Mattioli 2510125 Torino Italy;</p> <p>Department of Life Sciences and Systems BiologyUniversity of Torino Viale P.A. Mattioli 2510125 Torino Italy;</p> <p>Department of Life Sciences and Systems BiologyUniversity of Torino Viale P.A. Mattioli 2510125 Torino Italy;</p> </div> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zhdw" style="display: none;">展开▼</span> </div> </div> </li> <li > <span class="lefttit">收录信息</span> <span style="width: 86%;vertical-align: text-top;display: inline-block;"></span> </li> <li> <span class="lefttit">原文格式</span> <span>PDF</span> </li> <li> <span class="lefttit">正文语种</span> <span>eng</span> </li> <li> <span class="lefttit">中图分类</span> <span><a href="https://www.zhangqiaokeyan.com/clc/183.html" title="微生物学">微生物学;</a></span> </li> <li class="antistop"> <span class="lefttit">关键词</span> <p style="width: 86%;vertical-align: text-top;"> </p> </li> </ul> </div> </div> <div class="literature cardcommon" id="literaturereference" style="display:none"> <div class="similarity "> <h3 class="all_title" id="enpatent111">引文网络</h3> <div class="referencetab clearfix"> <ul id="referencedaohang"> <li dataid="referenceul">参考文献</li> <li dataid="citationul">引证文献</li> <li dataid="commonreferenceul">共引文献</li> <li dataid="commoncitationul">同被引文献</li> <li dataid="tworeferenceul">二级参考文献</li> <li dataid="twocitationul">二级引证文献</li> </ul> </div> <div class="reference_details" id="referenceList"> <ul id="referenceul"></ul> <ul id="citationul"></ul> <ul id="commonreferenceul"></ul> <ul id="commoncitationul"></ul> <ul id="tworeferenceul"></ul> <ul id="twocitationul"></ul> </div> </div> </div> <div class="literature cardcommon"> <div class="similarity "> <h3 class="all_title" id="enpatent66">相似文献</h3> <div class="similaritytab clearfix"> <ul> <li class="active" >外文文献</li> <li >中文文献</li> </ul> </div> <div class="similarity_details"> <ul > <li> <div> <b>1. </b><a class="enjiyixqcontent" href="/journal-foreign-detail/0704023228516.html">The virome of the arbuscular mycorrhizal fungus <i xmlns="http://www.wiley.com/namespaces/wiley">Gigaspora margaritaGigaspora margarita reveals the first report of DNA fragments corresponding to replicating non‐retroviral RNA viruses in fungi</a> <b>[J]</b> . <span> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Turina Massimo&option=202" target="_blank" rel="nofollow" class="tuijian_auth tuijian_authcolor">Turina Massimo,</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Ghignone Stefano&option=202" target="_blank" rel="nofollow" class="tuijian_auth tuijian_authcolor">Ghignone Stefano,</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Astolfi Nausicaa&option=202" target="_blank" rel="nofollow" class="tuijian_auth tuijian_authcolor">Astolfi Nausicaa,</a> <a href="/journal-foreign-22868/" target="_blank" rel="nofollow" class="tuijian_authcolor">Environmental microbiology .</a> <span>2018</span><span>,第6期</span> </span> </div> <p class="zwjiyix translation" style="max-width: initial;height: auto;word-break: break-all;white-space: initial;text-overflow: initial;overflow: initial;"> <span>机译：丛枝菌根真菌的生物动物<i xmlns =“http://www.wiley.com/namespaces/wiley”> gigaspora margarita </ i> gigaspora margarita揭示了对应于复制非逆转录病毒RNA病毒的DNA片段的第一报告在真菌</span> </p> </li> <li> <div> <b>2. </b><a class="enjiyixqcontent" href="/journal-foreign-detail/0704019838714.html">Fluorine at the C5 Position of 2′‐Deoxyuridine Enhances Repair of a <i xmlns="http://www.wiley.com/namespaces/wiley">OO <sup xmlns="http://www.wiley.com/namespaces/wiley">44 ‐Methyl Adduct by <i xmlns="http://www.wiley.com/namespaces/wiley">OO <sup xmlns="http://www.wiley.com/namespaces/wiley">66 ‐Alkylguanine DNA Alkyltransferases</a> <b>[J]</b> . <span> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Sacre Lauralicia&option=202" target="_blank" rel="nofollow" class="tuijian_auth tuijian_authcolor">Sacre Lauralicia,</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Wilds Christopher J.&option=202" target="_blank" rel="nofollow" class="tuijian_auth tuijian_authcolor">Wilds Christopher J. </a> <a href="/journal-foreign-23259/" target="_blank" rel="nofollow" class="tuijian_authcolor">European journal of organic chemistry .</a> <span>2017</span><span>,第20期</span> </span> </div> <p class="zwjiyix translation" style="max-width: initial;height: auto;word-break: break-all;white-space: initial;text-overflow: initial;overflow: initial;"> <span>机译：2'-脱氧尿苷的C5位置的氟增强了A <i XMLNS =“http://www.wiley.com/namespaces/wiley”> O </ i> o <sup xmlns =“http：//www .wiley.com /命名空间/ wiley“> 4 </ sup> 4 - 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The virome of the arbuscular mycorrhizal fungus Gigaspora margaritaGigaspora margarita reveals the first report of DNA fragments corresponding to replicating non‐retroviral RNA viruses in fungi

摘要