首页> 外文期刊>Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases >Molecular taxonomy and phylogenetic inferences of Bichromomyia flaviscutellata complex based on the COI gene DNA barcode region
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Molecular taxonomy and phylogenetic inferences of Bichromomyia flaviscutellata complex based on the COI gene DNA barcode region

机译:基于COI基因DNA条形码区的Bichromomyia Flaviscutellata复合物的分子分类和系统发育推论

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Leishmaniasis is considered one of the six most important infectious diseases in the world. In spite of its importance, the leishmaniasis is one of the world's most neglected tropical diseases. Bichromomyia flaviscutellata sensu lato is a complex composed of at least three species: B. flaviscutellata sensu stricto, B. reducta and B. olmeca. The latter is composed of three subspecies: B. olmeca olmeca, B. olmeca bicolor and B. olmeca nociva, which are distributed from Central America to South America. Of these, B. flaviscutellata s.s. is recognized as the main vector of Leishmania amazonensis in Brazil. The present study aimed to identify molecularly the species and subspecies of the B. flaviscutellata complex using the 5' region of the COI gene (Barcode region). A total of 44 specimens, comprising 22 B. flaviscutellata s.s. and 22 B. olmeca nociva, were analyzed from six localities in the Brazilian Amazon: five in the State of Amazonas (Autazes, Manaus, Pitinga, Novo Airao, and Rio Preto da Eva), and one in the State of Para (Serra do Cachorro). Three sequences from B. olmeca olmeca and one of B. olmeca bicolor from GenBank were also added to the dataset, totaling 48 sequences with a length of 549 base pairs (bp). The total dataset generated 28 haplotypes and four disconnected networks. Phylogenetic analyses using three algorithms (Neighbor-Joining [NJ], Maximum Likelihood [ML] and Bayesian Inference [BI]) generated similar topologies and most clades were from moderately to highly supported. The phylogenetic relationship, together with genetic distance values (1%) and haplotypes networks, confirm the position of B. olmeca bicolor as a subspecies of B. olmeca olmeca. However, B. olmeca nociva was closer phylogenetically to B. flaviscutellata s.s. than to B. olmeca olmeca and B. olmeca bicolor. Additionally, the haplotype network separated B. olmeca nociva from B. olmeca olmeca and B. olmeca bicolor. These findings, combined with previous morphological data, suggest that the B. olmeca nociva should be elevated to full-species status. The findings of this study also found that B. flaviscutellata s.s. populations may be in process of forming lineages.
机译:Leishmaniaisis被认为是世界上六种最重要的传染病之一。尽管重要的是,Leishmaniasis是世界上最忽视的热带疾病之一。 Bichromomyia Flaviscutellata Sensu Lato是一个由至少三种种类组成的复杂性:B.Flaviscutellata Sensu Sticho,B. reducta和B. Olmeca。后者由三个亚种组成:B. Olmeca Olmeca,B. Olmeca Bicolor和B. Olmeca Nociva,这些奥尔米加位于美国中美洲到南美洲。其中,B.Flaviscutellata S.S.被认为是巴西利斯曼亚马逊的主要传染媒介。本研究旨在使用COI基因(条形码区)的5'区域来鉴定分子和亚型的B.Flaviscutellata复合物的种类和亚种。共有44个标本,包括22b.Flaviscutellata S.S.和22 B. Olmeca Nociva从巴西亚马逊的六个地方分析:五个地方在亚马逊(Autazes,Manaus,Pinga,Novo Airao和Rio Preto da Eva)中,以及帕拉(Serra) cachorro)。来自B. Olmeca Olmeca的三个序列和来自Genbank的B. Olmeca双子之一。在数据集中也被添加到数据集中,总计48个序列,长度为549个碱基对(BP)。总数据集生成28个单倍型和四个断开网络。使用三种算法(邻接[NJ],最大可能性[ML]和Bayesian推理[Bi])产生类似的拓扑,大多数曲折来自适度的算法。系统发育关系与遗传距离值(1%)和单倍型网络一起证实了B. Olmeca双子的位置作为B. Olmeca Olmeca的亚种。然而,B. Olmeca Nociva对B.Flaviscutellata的影响更接近。比B. Olmeca Olmeca和B. Olmeca双色。另外,单倍型网络分离来自B. Olmeca Nociva的B. Olmeca Olmeca和B. Olmeca双色。这些发现与先前的形态数据相结合,表明B. Olmeca Nociva应该提升到全物种状态。本研究的结果也发现B.Flaviscutellata S.S.人口可能是形成谱系的过程。

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