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首页> 外文期刊>Antonie van Leeuwenhoek: Journal of Microbiology and serology >Bacterial community pattern along the sediment seafloor of the Arctic fjorden (Kongsfjorden, Svalbard)
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Bacterial community pattern along the sediment seafloor of the Arctic fjorden (Kongsfjorden, Svalbard)

机译:沿着北极Fjorden(Kongsfjorden,Svalbard)的沉积物海底的细菌群落模式

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摘要

The Arctic region has been the focus of increasing attention as an ecosystem that is highly sensitive to changes associated with global warming. Although it was assumed to be vulnerable to changes in climate, a limited number of studies have been conducted on the surface sediment bacteria of Arctic fjorden. This study assessed the diversity and distribution pattern of bacterial communities in eight marine sediments along the seafloor in a high Arctic fjorden (Kongsfjorden, Svalbard). A total of 822 operational taxonomic units (OTUs) were identified by Illumina MiSeq sequencing, targeting the V3-V4 hypervariable regions of the 16S rRNA gene. In these surface marine sediments, more than half of the sequences belonged to the phylum Proteobacteria, followed by Bacteroidetes, Verrucomicrobia, Actinobacteria, Chloroflexi and Lentisphaerae. The bacterial genera Marinicella, Desulfobulbus, Lutimonas, Sulfurovum and clade SEEP-SRB4 were dominant in all samples. Analysis of similarity indicated that bacterial communities were significantly different among the inner, central and outer basins (r(2)=0.5, P=0.03<0.05). Canonical correspondence analysis and permutation tests revealed that location depth (r(2)=0.87, P<0.01), temperature (r(2)=0.88, P<0.01) and salinity (r(2)=0.88, P<0.05) were the most significant factors that correlated with the bacterial communities in the sediments. 28 differentially abundant taxonomic clades in the inner and outer basin with an LDA score higher than 2.0 were found by the LEfSe method. The Spearman correlation heat map revealed different degrees of correlation between most major OTUs and environmental factors, while some clades have an inverse correlation with environmental factors. The spatial patterns of bacterial communities along the Kongsfjorden may offer insight into the ecological responses of prokaryotes to climate change in the Arctic ecosystem, which makes it necessary to continue with monitoring.
机译:北极地区一直是对与全球变暖相关的变化非常敏感的生态系统,这是令人瞩目的重点。虽然假设易受气候变化的影响,但是在北极反向的表面沉积物细菌上进行了有限数量的研究。本研究评估了沿着高北极Fjorden(Kongsfjorden,Svalbard)的海底八个海洋沉积物中细菌社区的多样性和分布模式。通过Illumina miseq测序鉴定了总共822个操作分类单位(OTUS),靶向16S rRNA基因的V3-V4高变区域。在这些表面海洋沉积物中,超过一半的序列属于Phyleobacteria,其次是Bacteropetes,VerrucoMicrobia,Actinobacteria,Chloroflexi和Lentisphaerae。细菌属MariniCella,Desulfobulbus,Lutimonas,Sulfurovum和Clade SEDP-SRB4在所有样品中都是显着的。相似性分析表明,内部,中央和外盆之间的细菌群落显着不同(R(2)= 0.5,p = 0.03 <0.05)。规范对应分析和排列试验显示位置深度(R(2)= 0.87,P <0.01),温度(R(2)= 0.88,P <0.01)和盐度(R(2)= 0.88,P <0.05)是与沉积物中的细菌社区相关的最重要因素。 28通过lefse方法发现内外盆地中的差异丰富的盆地和外层盆地的分类水分。 Spearman相关热图揭示了大多数主要OTU和环境因素之间不同程度的相关性,而一些曲线与环境因素有反比相关性。沿着孔章福音的细菌社区的空间模式可能会对北极生态系统中的气候变化的核心变化的生态反应有所了解,这使得有必要继续监测。

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