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Comparative iTRAQ Proteomics Identified Myocardium Proteins Associated with Hypoxia of Yak

机译:比较Itraq蛋白质组学发现与牦牛缺氧相关的心肌蛋白质

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摘要

Background: Yaks inhabit high-altitude are well-adapted to the hypoxic environments.Though, the mechanisms involved in regulatory myocardial protein expression at high-altitude werenot completely understood.Objective: To revel the molecular mechanism of hypoxic adaptation in yak, here we have applied comparativemyocardial proteomics in between yak and cattle by isobaric Tag for Relative and AbsoluteQuantitation (iTRAQ) labelling.Method: To understand the systematic protein expression variations in myocardial tissues that explainthe hypoxic adaptation in yak, we have performed iTRAQ analysis combined with Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS). Bioinformatics analysis was performed to find theassociation of these Differentially Expressed Proteins (DEPs) in different functions and pathways. Proteinto protein interaction was analyzed by using STRING database.Result: 686 Differentially Expressed Proteins (DEPs) were identified in yak with respect to cattle.From which, 480 DEPs were up-regulated and 206 were down-regulated in yak. Upregulated expressionof ASB4, STAT, HRG, RHO and TSP4 in yak may be associated with angiogenesis, cardiovasculardevelopment, response to pressure overload to heart and regulation of myocardial contraction in responseto increased oxygen tension. The up-regulation of mitochondrial proteins, ACAD8, GPDH-M,PTPMT1, and ALDH2, may have contributed to oxidation within mitochondria, hypoxia-induced cellmetabolism and protection of heart against cardiac ischemic injuries. Further, the upregulated expressionof SAA1, PTX, HP and MBL2 involved in immune response potentially helpful in myocardialprotection against ischemic injuries, extracellular matrix remodeling and free heme neutralization/clearance in oxygen-deficient environment.Conclusion: Therefore, the identification of these myocardial proteins in will be conducive to investigationof the molecular mechanisms involved in hypoxic adaptations of yaks at high-altitude condition.
机译:背景:牦牛栖息地高海拔很好地适应缺氧环境。虽然,涉及在高空Werenot中的调节心肌蛋白表达的机制完全理解。目的:陶醉于牦牛缺氧适应的分子机制,我们有应用的比较微观蛋白质组学蛋白质组学蛋白质组学对相对和绝对相容(ITRAQ)Labelling.method.method.method.method.Method.2Method.Method,了解牦牛缺氧适应的心肌组织的系统蛋白质表达变化,我们已经进行了ITRAQ分析与液相色谱 - 串联相结合质谱(LC-MS / MS)。进行生物信息学分析以发现在不同函数和途径中的这些差异表达蛋白质(DEP)的分离。通过使用字符串数据库分析蛋白质蛋白质相互作用。结果:686差异表达蛋白质(DEPS)在牦牛中鉴定在牛中。从而上调480℃,牦牛中的206次下调。牦牛中的ASB4,STAT,HRG,RHO和TSP4的上调表达可能与血管生成,心肌朗科开发,对压力过载的反应和心肌收缩的响应相关,并在响应增加氧气张力。线粒体蛋白,ACAD8,GPDH-M,PTPMT1和ALDH2的上调可能导致线粒体内的氧化,缺氧诱导的蜂窝状代谢和心脏保护免受心脏缺血性损伤。此外,参与免疫反应的SAA1,PTX,HP和MBL2的上调表达可能有助于对缺血性损伤的心肌保护,细胞外基质重塑和无氧环境中的游离血红液中和/间隙。结论:因此,鉴定这些心肌蛋白质将有利于调查在高海拔条件下牦牛缺氧适应的分子机制进行调查。

著录项

  • 来源
    《Current proteomics 》 |2019年第4期| 共16页
  • 作者单位

    School of Life Science and Engineering Southwest University of Science and Technology;

    Institute of Qinghai-Tibetan Plateau Southwest Minzu University;

    School of Life Science and Engineering Southwest University of Science and Technology;

    School of Life Science and Engineering Southwest University of Science and Technology;

    School of Life Science and Engineering Southwest University of Science and Technology;

    School of Life Science and Engineering Southwest University of Science and Technology;

    School of Life Science and Engineering Southwest University of Science and Technology;

    School of Life Science and Engineering Southwest University of Science and Technology;

    School of Life Science and Engineering Southwest University of Science and Technology;

    School of Life Science and Engineering Southwest University of Science and Technology;

    School of Life Science and Engineering Southwest University of Science and Technology;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 蛋白质 ;
  • 关键词

    yak; cattle; myocardium; proteome; hypoxic adaptation; ribs;

    机译:牦牛;牛;心肌;蛋白质组;缺氧适应;肋骨;

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