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首页> 外文期刊>Current Microbiology: An International Journal >Characterization and Genome Sequence of Marine Alteromonas gracilis Phage PB15 Isolated from the Yellow Sea, China
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Characterization and Genome Sequence of Marine Alteromonas gracilis Phage PB15 Isolated from the Yellow Sea, China

机译:从黄海中分离的海洋antoromonas gracilis噬菌体pb15的特征和基因组序列

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摘要

A novel marine Alteromonas gracilis siphovirus, phage PB15, was isolated from the surface water of the Yellow Sea in August 2015. It has a head diameter of 58 +/- 5 nm head and a contractile tail approximately 105 +/- 10 nm in length, and overall, the morphology suggests that PB15 belongs to the family Siphoviridae. PB15 phage is stable at over the temperature range 0-60 A degrees C. The best MOI of these phage was 0.1, and infectivity decreased above 60 A degrees C. The results suggest that phage is stable at pH value ranging between 3.0 and 11.0. Chloroform test shows that PB15 is not a lipid-containing phage. A one-step growth curve with a strain of A. gracilis gave a latent period of 16 min and rise period of 24 min and burst size of 60 PFU/cell. Genomic analysis of PB15 reveals a genome size of 37,333 bp with 45.52% G+C content, and 61 ORFs. ORF sequences accounted for 30.36% of the genome sequence. There is no obvious similarity between PB15 and other known phages by genomic comparison using the BLASTN tool in the NCBI database.
机译:一部小型海洋alteroMonas Gracilis Siphovirus,噬菌体PB15从2015年8月的黄海地表水中分离出来。它的头直径为58 +/- 5nm头,收缩尾部长度约为105 +/- 10nm并且总体而言,形态表明PB15属于西维罗伐的家族。 PB15噬菌体在0-60℃的温度范围内稳定。这些噬菌体的最佳MOI为0.1,并且感染率降低60℃。结果表明噬菌体在3.0和11.0之间的pH值下稳定。氯仿试验表明PB15不是含脂质的噬菌体。具有A的菌株的一步生长曲线。Gracilis的潜伏期为16分钟,升高为24分钟,突发大小为60pfu /细胞。 PB15的基因组分析显示出37,333bp的基因组大小,具有45.52%G + C含量和61个ORF。 ORF序列占基因组序列的30.36%。通过NCBI数据库中的基因组比较,PB15和其他已知噬菌体之间没有明显的相似性。

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