The complete chloroplast genome sequence of Emphasis Type='Italic'>Fokienia hodginsii/Emphasis> (Cupressaceae), an endangered tree

摘要

Fokienia hodginsii : is (Cupressaceae) an endangered tree species endemic to China, Vietnam and Laos. The complete chloroplast (cp) genome sequence of the F. hodginsii was determined using Illumina pair-end sequencing data. The circular genome is 127,777?bp long with 116 single copy genes and two duplicated genes ( trnI-CAU, trnQ-UUG ). The genome contains 120 genes, including 83 protein-coding genes, four ribosomal RNA genes and 33 transfer RNA genes. Fifteen genes have a single intron, and two genes ( rps12 and ycf3 ) have a couple of introns. Its cp genome does not contain canonical IRs, and the overall A?+?T content is 65.0%. Further, phylogenetic analysis suggested that F. hodginsii is closely related to species of Chamaecyparis lawsoniana .