首页> 外文期刊>Conservation Genetics Resources >The complete chloroplast genome sequence of an endangered species, Emphasis Type='Italic'>Dendrobium pendulum/Emphasis> Roxb. (Orchidaceae)
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The complete chloroplast genome sequence of an endangered species, Emphasis Type='Italic'>Dendrobium pendulum/Emphasis> Roxb. (Orchidaceae)

机译:濒危物种的完全叶绿体基因组序列,&重点型=“斜体”>石斛型& /重点> Roxb。 (兰科西)

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摘要

Dendrobium pendulum Roxb. (Orchidaceae) is an endangered ornamental plant. We report here the complete chloroplast (cp) genome sequence of D. pendulum. D. pendulum is 153,248?bp in length. The complete cp genome sequence has a typical quadripartite structure, comprising a pair of inverted repeat (IR) regions of 26,398?bp, a large single-copy (LSC) region of 85,852?bp and a small single-copy (SSC) region of 14,600?bp. The chloroplast genome contains 131 genes (124 unique), including 78 protein-coding genes, 8 ribosomal RNA (rRNA) genes and 38 transfer RNA (tRNA) genes. The overall GC content of the whole genome is 37.5%. The phylogenetic analysis suggested that the D. pendulum is mostly related taxa with Dendrobium officinale which forms a sister group to the Dendrobium.
机译:石斛柱roxb。 (兰科西)是一种濒临灭绝的观赏植物。 我们在此报告D.摆的完全叶绿体(CP)基因组序列。 D.摆锤的长度为153,248磅。 完整的CP基因组序列具有典型的四重结构结构,包括一对倒置重复(IR)区域,26,398磅,一个大单拷贝(LSC)区域为85,852磅,BP和小单拷贝(SSC)区域 14,600?BP。 叶绿体基因组含有131个基因(124个独特),其中包括78个蛋白质编码基因,8个核糖体RNA(RNA)基因和38种转移RNA(TRNA)基因。 全基因组的总体GC含量为37.5%。 系统发育分析表明,D.摆锤大多数有型卵巢卵巢的分类群,形成姐妹组到石斛。

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  • 来源
    《Conservation Genetics Resources》 |2018年第3期|共3页
  • 作者单位

    Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry Shaanxi Normal University;

    Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry Shaanxi Normal University;

    Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry Shaanxi Normal University;

    Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry Shaanxi Normal University;

    Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry Shaanxi Normal University;

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  • 原文格式 PDF
  • 正文语种 other
  • 中图分类 普通生物学;
  • 关键词

    Dendrobium pendulum; Complete chloroplast genome; Illumina sequencing; Phylogeny;

    机译:石斛中;完全叶绿体基因组;illumina测序;系统发生;

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