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首页> 外文期刊>The journal of physical chemistry, B. Condensed matter, materials, surfaces, interfaces & biophysical >Biased sampling of nonequilibrium trajectories: Can fast switching simulations outperform conventional free energy calculation methods?
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Biased sampling of nonequilibrium trajectories: Can fast switching simulations outperform conventional free energy calculation methods?

机译:非平衡轨迹的有偏采样:快速切换模拟是否可以优于传统的自由能计算方法?

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摘要

We have investigated the maximum computational efficiency of reversible work calculations that change control parameters in a finite amount of time. Because relevant nonequilibrium averages are slow to converge, a bias on the sampling of trajectories can be beneficial. Such a bias, however, can also be employed in conventional methods for computing reversible work, such as thermodynamic integration or umbrella sampling. We present numerical results for a simple one-dimensional model and for a Widom insertion in a soft sphere liquid, indicating that, with an appropriately chosen bias, conventional methods are in fact more efficient. We describe an analogy between nonequilibrium dynamics and mappings between equilibrium ensembles, which suggests that the practical inferiority of fast switching is quite general. Finally, we discuss the relevance of adiabatic invariants in slowly driven Hamiltonian systems for the application of Jarzynski's theorem.
机译:我们研究了可逆功计算的最大计算效率,这些功在有限的时间内更改了控制参数。由于相关的非均衡平均值收敛较慢,因此在轨迹采样上施加偏差可能是有益的。但是,这种偏差也可以用在用于计算可逆功的常规方法中,例如热力学积分或伞形采样。我们提出的数值结果对于一个简单的一维模型和用于代表智慧插入在一个软球体液体,这表明,与适当选择的偏压,传统的方法是在实际上更有效。我们描述了非平衡动力学与平衡集合之间的映射之间的类比,这表明快速切换的实际劣势是相当普遍的。最后,我们讨论了在缓慢驱动的哈密顿系统中绝热不变量对于Jarzynski定理的应用的相关性。

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