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On the efficiency of biased sampling of the multiple state path ensemble

机译:多状态路径集合的有偏采样效率

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Developed for complex systems undergoing rare events involving many (meta)stable states, the multiple state transition path sampling aims to sample from an extended path ensemble including all possible trajectories between any pair of (meta)stable states. The key issue for an efficient sampling of the path space in this extended ensemble is sufficient switching between different types of trajectories. When some transitions are much more likely than others the collective sampling of the different path types can become difficult. Here we introduce a Wang-Landau based biasing approach to improve the sampling. We find that the biasing of the multiple state path ensemble does not influence the switching behavior, but does improve the sampling and thus the quality of the individual path ensembles.
机译:多状态转换路径采样是针对经历罕见事件(涉及许多(亚)稳态)的复杂系统而开发的,旨在从扩展路径集合中采样,包括任何一对(亚)稳态之间的所有可能轨迹。在此扩展集合中有效采样路径空间的关键问题是在不同类型的轨迹之间进行足够的切换。如果某些过渡比其他过渡更有可能,则对不同路径类型的集体采样可能会变得困难。在这里,我们介绍一种基于Wang-Landau的偏向方法来改善采样。我们发现,多状态路径集合的偏置不会影响切换行为,但会改善采样,因此可以改善单个路径集合的质量。

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