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A growing string method for determining transition states:Comparison to the nudged elastic band and string methods

机译:确定过渡态的增长弦法:与微动的弹性带和弦法的比较

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Interpolation methods such as the nudged elastic band and string methods are widely used for calculating minimum energy pathways and transition states for chemical reactions.Both methods require an initial guess for the reaction pathway.A poorly chosen initial guess can cause slow convergence,convergence to an incorrect pathway,or even failed electronic structure force calculations along the guessed pathway.This paper presents a growing string method that can find minimum energy pathways and transition states without the requirement of an initial guess for the pathway.The growing string begins as two string fragments,one associated with the reactants and the other with the products.Each string fragment is grown separately until the fragments converge.Once the two fragments join,the full string moves toward the minimum energy pathway according to the algorithm for the string method.This paper compares the growing string method to the string method and to the nudged elastic band method using the alanine dipeptide rearrangement as an example.In this example,for which the linearly interpolated guess is far from the minimum energy pathway,the growing string method finds the saddle point with significantly fewer electronic structure force calculations than the string method or the nudged elastic band method.
机译:插值方法(例如微动弹性带和弦法)被广泛用于计算化学反应的最小能量路径和跃迁状态。这两种方法都需要对反应路径进行初始猜测。选择不当的初始猜测会导致收敛缓慢,收敛到错误的路径,甚至是沿着推测的路径计算的电子结构力计算失败。本文提出了一种增长的弦方法,该方法可以找到最小的能量路径和过渡状态,而无需对该路径进行初始猜测。生长的弦开始于两个弦片段,每个串片段分别生长直到片段汇合。一旦两个片段结合,则根据串法的算法,整个串都朝着最小能量路径移动。将增长的弦方法与弦方法和微动的弹性带方法进行比较以丙氨酸二肽重排为例。在本例中,线性内插的猜测距离最小能量路径很远,生长的弦法找到的鞍点的电子结构力计算明显少于弦法或微动的弹性。带方法。

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