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首页> 外文期刊>Journal of Molecular Biology >ATOMIC RESOLUTION (1.0 ANGSTROM) CRYSTAL STRUCTURE OF FUSARIUM SOLANI CUTINASE - STEREOCHEMICAL ANALYSIS
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ATOMIC RESOLUTION (1.0 ANGSTROM) CRYSTAL STRUCTURE OF FUSARIUM SOLANI CUTINASE - STEREOCHEMICAL ANALYSIS

机译:枯萎镰刀菌蛋白酶的原子分辨(1.0 ST)晶体结构-立体化学分析

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X-ray data have been recorded to 1.0 Angstrom resolution from a crystal of Fusarium solani cutinase using synchrotron radiation and an imaging-plate scanner. The anisotropic treatment of thermal motion led to a fivefold increase in accuracy and to a considerable quality improvement in the electron density maps with respect to an intermediate isotropic model. The final model has an R-factor of 9.4%, with a mean coordinate error of 0.021 Angstrom, as estimated from inversion of the least-squares matrix. The availability of an accurate structure at atomic resolution and of meaningful estimates of the errors in its atomic parameters, allowed an extensive analysis of several stereochemical parameters, such as peptide planarity, main-chain and some side-chain bond distances. The hydrogen atoms could be clearly identified in the electron density, thus providing unambiguous evidence on the protonation state of the catalytic histidine residue. The atomic resolution revealed an appreciable extent of flexibility in the cutinase active site, which might be correlated with a possible adaptation to different substrates. The anisotropic treatment of thermal factors provided insights into the anisotropic nature of motions. The analysis of these motions in the two loops delimiting the catalytic crevice pointed out a ''breath-like'' movement in the substrate binding region of cutinase. (C) 1997 Academic Press Limited. [References: 41]
机译:使用同步辐射和成像板扫描仪已从茄形镰刀菌角质酶的晶体中记录了X射线数据,分辨率为1.0埃。相对于中间各向同性模型,热运动的各向异性处理导致精度提高了五倍,并导致电子密度图中的质量显着提高。最终模型的R因子为9.4%,平均坐标误差为0.021埃,根据最小二乘矩阵的求逆估计。在原子分辨率下可获得精确结构以及对其原子参数中的误差进行有意义的估计,从而可以对多个立体化学参数进行广泛分析,例如肽平面度,主链和某些侧链键距。氢原子可以在电子密度中清楚地识别,从而为催化组氨酸残基的质子化状态提供了明确的证据。原子分辨率揭示了角质酶活性位点的可观程度的柔性,这可能与对不同底物的可能适应性相关。热因素的各向异性处理提供了有关运动的各向异性性质的见识。对两个循环中界定催化裂隙的运动的分析指出了角质酶底物结合区域中的“呼吸状”运动。 (C)1997 Academic Press Limited。 [参考:41]

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