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首页> 外文期刊>Journal of computational biology: A journal of computational molecular cell biology >Identifying Contributors of DNA Mixtures by Means of Quantitative Information of STR Typing
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Identifying Contributors of DNA Mixtures by Means of Quantitative Information of STR Typing

机译:通过STR分型的定量信息识别DNA混合物的贡献者。

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Estimating the weight of evidence in forensic genetics is often done in terms of a likelihood ratio, LR. The LR evaluates the probability of the observed evidence under competing hypotheses. Most often, probabilities used in the LR only consider the evidence from the genomic variation identified using polymorphic genetic markers. However, modern typing techniques supply additional quantitative data, which contain very important information about the observed evidence. This is particularly true for cases of DNA mixtures, where more than one individual has contributed to the observed biological stain. This article presents a method for including the quantitative information of short tandem repeat (STR) DNA mixtures in the LR. Also, an efficient algorithmic method for finding the best matching combination of DNA mixture profiles is derived and implemented in an on-line tool for twoand three-person DNA mixtures. Finally, we demonstrate for two-person mixtures how this best matching pair of profiles can be used in estimating the likelihood ratio using importance sampling. The reason for using importance sampling for estimating the likelihood ratio is the often vast number of combinations of profiles needed for the evaluation of the weight of evidence. Online tool is available at http://people.math.aau.dk/*tvede/dna/.
机译:通常根据似然比LR来估算法医遗传学中证据的权重。 LR评估竞争假设下观察到的证据的概率。最常见的是,LR中使用的概率仅考虑使用多态遗传标记物鉴定出的基因组变异的证据。但是,现代打字技术提供了额外的定量数据,其中包含有关观察到的证据的非常重要的信息。对于DNA混合物的情况尤其如此,其中一个以上的个体导致了观察到的生物污渍。本文提出了一种在LR中包含短串联重复(STR)DNA混合物的定量信息的方法。而且,推导了一种有效的算法方法,用于查找DNA混合物轮廓的最佳匹配组合,并在在线工具中用于两人和三人DNA混合物。最后,我们为两人混合演示了如何使用这种最匹配的配置文件对来通过重要性抽样估计似然比。使用重要性抽样来估计似然比的原因是,评估证据权重通常需要使用大量配置文件组合。可从http://people.math.aau.dk/*tvede/dna/获得在线工具。

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