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首页> 外文期刊>Cladistics: The international journal of the Willi Hennig Society >Sources of character conflict in a clade of water striders (Heteroptera : Gerridae)
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Sources of character conflict in a clade of water striders (Heteroptera : Gerridae)

机译:一群水ider(Heteroptera:Gerridae)中角色冲突的根源

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Incongruence among trees reconstructed with different data may stem from historical (gene tree-species tree conflict) or process (character change biases) phenomena. Regardless of the source, incongruent data, as determined with "global" measures of homoplasy, have often been excluded from parsimony analysis of the combined data. Recent studies suggest that these homoplasy measures do not predict the contribution of each character to overall tree structure. Branch support measures identify, on a character to node basis, sources of support and conflict resulting from a simultaneous analysis of the data. We implement these branch support measures to identify sources of character conflict in a clade of water striders consisting of Gerris Fabricius, Aquarius Schellenberg, and Limnoporus Stal species. Separate analyses of morphology, mitochondrial cytochrome oxidase I (COI), large mitochondrial ribosomal subunit (16SrRNA), and elongation factor-1alpha (EF-1alpha) data resulted in cladograms that varied in resolution and topological concordance. Simultaneous analysis of the data resulted in two trees that were unresolved for one node in a strict consensus. The topology agreed with current classification except for the placements of Aquarius chilensis and the Aquarius remigis species group closer to Gerris than to congeneric species. Branch support measures indicated that support derived from each data set varied among nodes, but COI had an overall negative effect on branch support. However, Spearman rank correlation of partitioned branch support values indicated no negative associations of branch support between any data sets and a positive association between EF-1alpha and 16SrRNA. Thus incongruence among data sets was not drastic and the gene-tree versus species tree phenomenon was not implicated. Biases in character change were a more likely reason for incongruence, although saturation curves and incongruence length difference for COI indicated little potential for homoplasy. However, a posteriori inspection of COI nucleotide change with reference to the simultaneous analysis tree revealed AT and codon biases. These biases were not associated with branch support measures. Therefore, it is difficult to predict incongruence or identify its cause. Exclusion of data is ill advised because every character is potentially parsimony informative.
机译:用不同数据重建的树木之间的不一致可能源于历史(基因树种与树木之间的冲突)或过程(字符变化偏见)现象。无论来源如何,通过“整体”同质性测度确定的不一致数据经常被排除在合并数据的简约分析之外。最近的研究表明,这些同质测量不能预测每个字符对整体树结构的贡献。分支机构的支持措施基于特征对节点的基础上,确定了同时分析数据所产生的支持和冲突来源。我们实施了这些分支支持措施,以识别由Gerris Fabricius,Aquarius Schellenberg和Limnoporus Stal物种组成的水ider进化中的角色冲突根源。对形态,线粒体细胞色素氧化酶I(COI),线粒体大核糖体亚基(16SrRNA)和延伸因子1alpha(EF-1alpha)数据进行单独分析,得出的条形图在分辨率和拓扑一致性方面各不相同。数据的同时分析导致在严格的共识下,两个树在一个节点上都无法解析。拓扑结构与当前分类一致,只是水瓶座和水瓶座种群的位置比格里斯更近,而不是同类。分支机构的支持措施表明,从每个数据集获得的支持在节点之间有所不同,但是COI对分支机构的支持总体上具有负面影响。但是,Spearman等级相关的分区支链支持值表明,在任何数据集之间均无支链支持的负相关,而在EF-1alpha与16SrRNA之间无正相关。因此,数据集之间的不一致并不激烈,也没有涉及基因树对物种树的现象。尽管COI的饱和度曲线和不一致长度长度差异表明同质性的可能性很小,但性格变化的偏见更可能是导致不一致的原因。但是,参考同时分析树对COI核苷酸变化进行后验检查,发现AT和密码子偏倚。这些偏见与分支机构的支持措施无关。因此,很难预测不一致或确定其原因。建议排除数据,因为每个字符都可能具有简约信息。

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