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首页> 外文期刊>Zoology in the Middle East >Phylogenetic study of some Aporrectodea species based on molecular markers (Oligochaeta: Lumbricidae).
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Phylogenetic study of some Aporrectodea species based on molecular markers (Oligochaeta: Lumbricidae).

机译:基于分子标记(Oligochaeta:Lumbricidae)的一些线虫物种的系统发育研究。

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The Nicodrilus genus is not accepted in the nomenclature according to ICZN; Aporrectodea term is used. However, according to Bouche, Aporrectodea and Allolobophora genera are not homogeneous and are supposed as polyphyletic genera. The aim is to study the phylogenetic structure of Aporrectodea genus in order to verify its cladistic nature and its taxonomical validity. In this work, five species, belonging to the Aporrectodea genus, as the most common in France are studied. First, we use usual morphological characteristics to identify each species. Species life history traits are included among morphological characteristics (e.g. clitellum, puberculum and pores position, Morren's gland, body size). Then, we pursue a molecular approach on individuals sampled in France. Molecular phylogenetic analyses are based on the sequences of nuclear (rDNA 28S) and mitochondrial (COI, rDNA 16S) gene regions and performed with maximum likelihood and bayesian inference. Phylogenetic analyses revealed two deep sister clades, Aporrectodea caliginosa species complex in one hand, and A. giardi, A. longa and A. nocturna in the other hand. The status of A. nocturna is recognized instead of A. longa and A. giardi ones. Our study cannot confirm the validity of Aporrectodea genus but highlights different lineages within species such as A. longa and A. caliginosa. Markers characterization ensures a molecular genotyping in lumbricids and begins to reveal intraspecific variabilities degrees unsuspected. CT Proceedings of the 5th International Oligochaete Taxonomy Meeting (5th IOTM), Beatenberg, Switzerland, 11-15 April 2011.
机译:根据ICZN,术语中不接受Nicodrilus属;使用了Aporrectodea术语。但是,根据Bouche的说法,Aporrectodea和Allolobophora属不是同质的,被认为是多系属。目的是研究Aporrectodea属的系统发育结构,以验证其分类性质和分类学有效性。在这项工作中,研究了在法国最常见的属于Aporrectodea属的5个种。首先,我们使用通常的形态特征来识别每个物种。物种的生活史特征包括在形态特征中(例如,斜tell,青春期和毛孔位置,莫伦腺,体型)。然后,我们对在法国采样的个人采用分子方法。分子系统发育分析基于核(rDNA 28S)和线粒体(COI,rDNA 16S)基因区域的序列,并以最大似然和贝叶斯推断进行。系统发育分析揭示了两个深的姐妹进化枝,一方面是caliporosa caliporosa种复合体,另一方面是giardi,A。longa和A. nocturna。夜曲的地位被认可,而不是长曲霉和贾第虫。我们的研究无法确定正确的Aporrectodea属,但强调了诸如A. longa和A. caliginosa的物种内的不同谱系。标记的表征确保了的分子基因分型,并开始揭示出未曾怀疑的种内变异度。第五届国际Oligochaete分类法会议(第五届IOTM)的CT会议录,2011年4月11日至15日,瑞士比滕贝格。

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