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首页> 外文期刊>The Journal of Organic Chemistry >Molecular Building Kit of Fused-Proline-Derived Peptide Mimetics Allowing Specific Adjustment of the Dihedral Ψ Angle
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Molecular Building Kit of Fused-Proline-Derived Peptide Mimetics Allowing Specific Adjustment of the Dihedral Ψ Angle

机译:融合脯氨酸衍生的肽模拟物的分子构建试剂盒,可特定调节二面角的夹角

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Proline-derived peptide mimetics have become an area of paramount importance in peptide and protein chemistry. Since protein crystal structures frequently display Ψ angles of 140-170°for prolyl moieties, our intention was to design a completely novel series of 2,3-fused-proline-derived lactams covering this particular conformational space. Extending our recently described toolset of spirocyclic reverse-turn mimetics, we synthesized pyrrolidinyl-fused seven-, eight-, and nine-membered unsaturated lactam model peptides taking advantage of Grubbs' ring-closing metathesis. Investigating the seven-membered lactam 3a by means of IR and NMR spectroscopy and semiempirical molecular dynamics simulations, we could not observe a U-turn conformation; however, increasing the ring size to give eight- and nine-membered congeners revealed moderate and high type II β-turn inducing properties. Interestingly, the conformational properties of our model systems depend on both the ring size of the fused dehydro-Freidinger lactam and the position of the endocyclic double bond. Superior reverse-turn inducing properties could be observed for the fused azacyclononenone 3e. According to diagnostic transanular NOEs, a discrete folding principle of the lactam ring strongly deviating from the regioisomeric lactams 3c,f explains the conformational behavior. Hence, we were able to establish a molecular building kit that allows adjustments of a wide range of naturally occurring proline Ψ angles and thus can be exploited to probe molecular recognition and functional properties of biological systems.
机译:脯氨酸衍生的肽模拟物已成为肽和蛋白质化学领域中至关重要的领域。由于蛋白质晶体结构对于脯氨酰基部分通常表现出140-170°的θ角,因此我们的目的是设计一个全新的2,3-融合脯氨酸衍生的内酰胺系列,覆盖该特定的构象空间。扩展了我们最近描述的螺环逆向模拟的工具集,我们利用Grubbs的闭环易位合成了吡咯烷基融合的7、8和9元不饱和内酰胺模型肽。通过IR和NMR光谱以及半经验分子动力学模拟研究七元内酰胺3a,我们无法观察到掉头构象。然而,增加环的大小以给出八元和九元同类物,则显示出中等和高的II型β转角诱导特性。有趣的是,我们模型系统的构象特性既取决于稠合的脱氢弗莱丁格内酰胺的环大小,也取决于环内双键的位置。对于稠合的氮杂环壬烯酮3e,可以观察到优异的反向诱导性能。根据诊断性经肛门NOEs,内酰胺环的离散折叠原理强烈偏离区域异构内酰胺3c,f解释了构象行为。因此,我们能够建立一种分子构建试剂盒,该试剂盒可调节多种自然发生的脯氨酸Ψ角,因此可用于探测分子识别和生物系统的功能特性。

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