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Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

机译:基于中药理论的清热药与活血化瘀药作用分类模型的建立

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Action (“gongxiao” in Chinese) of traditional Chinese medicine (TCM) is the high recapitulation for therapeutic and health-preserving effects under the guidance of TCM theory. TCM-defined herbal properties (“yaoxing” in Chinese) had been used in this research. TCM herbal property (TCM-HP) is the high generalization and summary for actions, both of which come from long-term effective clinical practice in two thousands of years in China. However, the specific relationship between TCM-HP and action of TCM is complex and unclear from a scientific perspective. The research about this is conducive to expound the connotation of TCM-HP theory and is of important significance for the development of the TCM-HP theory. One hundred and thirty-three herbs including 88 heat-clearing herbs (HCHs) and 45 blood-activating stasis-resolving herbs (BAHRHs) were collected from reputable TCM literatures, and their corresponding TCM-HPs/actions information were collected from Chinese pharmacopoeia (2015 edition). The Kennard–Stone (K–S) algorithm was used to split 133 herbs into 100 calibration samples and 33 validation samples. Then, machine learning methods including supported vector machine (SVM), k-nearest neighbor (kNN) and deep learning methods including deep belief network (DBN), convolutional neutral network (CNN) were adopted to develop action classification models based on TCM-HP theory, respectively. In order to ensure robustness, these four classification methods were evaluated by using the method of tenfold cross validation and 20 external validation samples for prediction. As results, 72.7–100% of 33 validation samples including 17 HCHs and 16 BASRHs were correctly predicted by these four types of methods. Both of the DBN and CNN methods gave out the best results and their sensitivity, specificity, precision, accuracy were all 100.00%. Especially, the predicted results of external validation set showed that the performance of deep learning methods (DBN, CNN) were better than traditional machine learning methods (kNN, SVM) in terms of their sensitivity, specificity, precision, accuracy. Moreover, the distribution patterns of TCM-HPs of HCHs and BASRHs were also analyzed to detect the featured TCM-HPs of these two types of herbs. The result showed that the featured TCM-HPs of HCHs were cold, bitter, liver and stomach meridians entered, while those of BASRHs were warm, bitter and pungent, liver meridian entered. The performance on validation set and external validation set of deep learning methods (DBN, CNN) were better than machine learning models (kNN, SVM) in sensitivity, specificity, precision, accuracy when predicting the actions of heat-clearing and blood-activating stasis-resolving based on TCM-HP theory. The deep learning classification methods owned better generalization ability and accuracy when predicting the actions of heat-clearing and blood-activating stasis-resolving based on TCM-HP theory. Besides, the methods of deep learning would help us to improve our understanding about the relationship between herbal property and action, as well as to enrich and develop the theory of TCM-HP scientifically.
机译:中药作用是在中医理论指导下对治疗和保健作用的高度概括。这项研究使用了中药定义的草药特性(中文为“ yaoxing”)。中药草药特性(TCM-HP)是行动的高度概括和总结,两者均来自中国两千多年的长期有效临床实践。但是,从科学的角度来看,中医与中医作用之间的具体关系是复杂的,尚不清楚。对此的研究有利于阐明中医药理论的内涵,对中医药理论的发展具有重要意义。从著名的中医文献中收集了133种草药,包括88种清热草药(HCH)和45种活血化瘀药(BAHRHs),并从中国药典中收集了相应的TCM-HPs /作用信息( 2015版)。 Kennard–Stone(KS)算法用于将133种草药分为100个校准样品和33个验证样品。然后,采用了包括支持向量机(SVM),k近邻(kNN)在内的机器学习方法以及包括深层信念网络(DBN),卷积神经网络(CNN)在内的深度学习方法来开发基于TCM-HP的动作分类模型。理论分别。为了确保鲁棒性,使用十倍交叉验证和20个外部验证样本进行预测来评估这四种分类方法。结果,通过这四种类型的方法可以正确预测33个验证样本中的72.7–100%,包括17个HCH和16个BASRH。 DBN和CNN方法都给出了最好的结果,其灵敏度,特异性,精密度,准确性均为100.00%。特别是,外部验证集的预测结果表明,深度学习方法(DBN,CNN)的性能在敏感性,特异性,准确性,准确性方面优于传统的机器学习方法(kNN,SVM)。此外,还分析了六氯环己烷和BASRH的TCM-HPs的分布模式,以检测这两种草药的特征性TCM-HPs。结果表明,六氯环己烷的特征性中医冷,寒,苦,肝,胃经络进入;巴氏湿热,中,辛,辛,辛,肝经。深度学习方法(DBN,CNN)的验证集和外部验证集的性能在预测清热和活血化瘀作用的敏感性,特异性,精度,准确性方面均优于机器学习模型(kNN,SVM) -基于中医-HP理论的解析。在基于TCM-HP理论预测清热活血化瘀作用时,深度学习分类方法具有较好的泛化能力和准确性。此外,深度学习的方法将有助于我们加深对草药性质与作用之间关系的理解,科学地丰富和发展中医药理论。

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