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Construction of an Integrated Map of Haliotis diversicolor Using Microsatellite Markers

机译:利用微卫星标记构建杂色鲍鱼综合图谱

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摘要

Small abalone, Haliotis diversicolor, is naturally distributed along the coastal waters of East Asia from Japan to the Philippines. It is an economically important maricultured species in southern China and Taiwan. Genetic linkage maps for small abalone were constructed using a total of 308 simple sequence repeat markers including 297 novel markers. Segregation data on 96 progeny were genotyped using a pseudo-testcross strategy. Sixteen linkage groups were identified in both female and male maps, consistent with the haploid chromosome number. The female linkage map covered 758.3 cM, with an average interval of 5.2 cM. The male linkage map spanned a total genetic distance of 676.2 cM, with an average interval of 4.5 cM. An integrated map was constructed by incorporating the homologous parental linkage groups, resulting in 16 linkage groups with a total of 762.1 cM. Genome coverage of the integrated linkage map was approximately 80.7%. The genetic linkage maps of small abalone may facilitate marker-assisted selection and quantitative trait loci mapping.
机译:小鲍鱼Haliotis diversicolor,从日本到菲律宾沿东亚沿海水域自然分布。它是中国南部和台湾的一种重要的经济海水养殖品种。使用总共308个简单序列重复标记(包括297个新标记)构建了小鲍鱼的遗传连锁图。使用伪testcross策略对96个后代的分离数据进行基因分型。在雌性和雄性图中都鉴定出十六个连锁群,与单倍体染色体数一致。女性连接图覆盖758.3 cM,平均间隔为5.2 cM。男性连锁图谱的总遗传距离为676.2 cM,平均间隔为4.5 cM。通过整合同源的亲本连锁基团来构建整合图谱,从而产生16个连锁基团,总计762.1 cM。整合连锁图谱的基因组覆盖率约为80.7%。小鲍鱼的遗传连锁图谱可能有助于标记辅助选择和数量性状基因座定位。

著录项

  • 来源
    《Marine Biotechnology》 |2012年第1期|p.79-86|共8页
  • 作者单位

    College of Oceanography and Environmental Science, and State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, 361005, China;

    College of Oceanography and Environmental Science, and State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, 361005, China;

    College of Oceanography and Environmental Science, and State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, 361005, China;

    College of Oceanography and Environmental Science, and State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, 361005, China;

    College of Oceanography and Environmental Science, and State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, 361005, China;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Small abalone; Haliotis diversicolor; Linkage map; Microsatellite; Integrated map;

    机译:小鲍鱼;杂色鲍鱼;连锁图;微卫星;综合图;

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