首页> 外文期刊>Journal of the American Chemical Society >Solvent Interactions And Conformational Choice In A Corerna/-glycan Segment: Gas Phase Conformation Of The Central,rnbranching Trimannose Unit And Its Singly Hydrated Complex
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Solvent Interactions And Conformational Choice In A Corerna/-glycan Segment: Gas Phase Conformation Of The Central,rnbranching Trimannose Unit And Its Singly Hydrated Complex

机译:Corerna /聚糖链段中的溶剂相互作用和构象选择:中央支化三甘露糖单元及其单水合物的气相构象

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摘要

The intrinsic conformational preferences and structures of the branched trimannoside, α-phenyl 3,6-di-O-(α-D-mannopyranosyl)-α-D-mannopyranoside (which contains the same carbohydrates found in a key subunit of the core pentasaccharide in N-glycans) and its singly hydrated complex, have been investigated in the gas phase isolated at low temperature in a molecular beam expansion. Conformational assignments of their infrared ion dip spectra, based on comparisons between experiment and ONIOM (B3LYP/6-31 +G(d):HF/6-31G(d)) and single-point MP2 calculations have identified their preferred structures and relative energies. The unhydrated trimannoside populates a unique structure supported by two strong, central hydrogen bonds linking the central mannose unit (CM), and its two branches (3M and 6M) closely together, through a cooperative hydrogen-bonding network: OH4(CM)→OH6(3M)→OH6(6M). A closely bound structure is also retained in the singly hydrated oligosaccharide, with the water molecule bridging across the 3M and 6M branches to provide additional bonding. This structure contrasts sharply with the more open, entropically favored trimannoside structure determined in aqueous solution at 298 K. In principle this structure can be accessed from the isolated trimannoside structure by a simple conformational change, a twist about the α(1,3) glycosidic linkage, increasing the dihedral angle ψ[C1(3M)-O3(3M)-C3(CM)-C2(CM)] from ~74° to ~146° to enable accommodation of a water molecule at the centrally bound site occupied by the hydroxymethyl group on the 3M ring and mediation of the water-linked hydrogen-bonded network: OH4(CM) →OH_w→OH6(6M). The creation of a "water pocket" motif localized at the bisecting axis of the trimannoside is strikingly similar to the structure of more complex N-glycans in water, suggesting perhaps a general role for the "bisecting" OH4 group in the central (CM) mannose unit.
机译:分支三甘露糖苷α-苯基3,6-di-O-(α-D-甘露吡喃糖基)-α-D-甘露吡喃糖苷(其含有与核心五糖关键亚基中相同的碳水化合物)的固有构象偏好和结构N聚糖及其单水合配合物)已在低温下在气相中以分子束扩展的方式进行了研究。根据实验与ONIOM(B3LYP / 6-31 + G(d):HF / 6-31G(d))的比较以及单点MP2计算,确定了其红外离子浸没光谱的构象分配,并确定了它们的优选结构和相对能量。未水合的甜菊糖苷具有独特的结构,该结构由两个强大的中央氢键支撑,这些氢键通过一个氢键合作网络OH4(CM)→OH6将中央甘露糖单元(CM)及其两个分支(3M和6M)紧密连接在一起。 (3M)→OH6(6M)。在单水合的寡糖中还保留了紧密结合的结构,其中水分子跨3M和6M分支桥接以提供额外的键合。该结构与在298 K水溶液中测定的更开放的,受熵支持的三甘露糖苷结构形成鲜明对比。原则上,该结构可通过简单的构象变化(从α(1,3)糖苷绕成一团)从分离的三甘露糖苷结构中获得。连接,将二面角ψ[C1(3M)-O3(3M)-C3(CM)-C2(CM)]从约74°增大到约146°,以使水分子能够容纳在被其占据的中心结合位点3M环上的羟甲基和水连接的氢键网络介导:OH4(CM)→OH_w→OH6(6M)。出现在三甘露糖苷的二等分轴上的“水袋”基序的产生与水中更复杂的N-聚糖的结构惊人地相似,这表明“一等分”的OH4基团在中央(CM)可能具有一般作用甘露糖单位。

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