首页> 外文期刊>Journal of the American Chemical Society >Hydration Dynamics of a Peripheral Membrane Protein
【24h】

Hydration Dynamics of a Peripheral Membrane Protein

机译:外围膜蛋白的水化动力学

获取原文
获取原文并翻译 | 示例
       

摘要

Water dynamics in the hydration shell of the peripheral membrane protein annexin B12 were studied using MD simulations and Overhauser DNP-enhanced NMR, We show that retardation of water motions near phospholipid bilayers is extended by the presence of a membrane-bound protein, up to around 10 A above that protein. Near the membrane surface, electrostatic interactions with the lipid head groups strongly slow down water dynamics, whereas protein-induced water retardation is weaker and dominates only at distances beyond 10 A from the membrane surface. The results can be understood from a simple model based on additive contributions from the membrane and the protein to the activation free energy barriers of water diffusion next to the biomolecular surfaces. Furthermore, analysis of the intermolecular vibrations of the water network reveals that retarded water motions near the membrane shift the vibrational modes to higher frequencies, which we used to identify an entropy gradient from the membrane surface toward the bulk water. Our results have implications for processes that take place at lipid membrane surfaces, including molecular recognition, binding, and protein-protein interactions.
机译:使用MD模拟和Overhauser DNP增强的NMR研究了外周膜蛋白膜联蛋白B12的水合壳中的水动力学,我们显示磷脂双分子层附近的水运动的延迟由于膜结合蛋白的存在而延长,直至大约该蛋白质之上1​​0A。在膜表面附近,与脂质头基团的静电相互作用极大地减慢了水动力学,而蛋白质诱导的阻水作用较弱,并且仅在距膜表面超过10 A的距离处占主导地位。从一个简单的模型就可以理解结果,该模型基于膜和蛋白质对生物分子表面附近水扩散的无活化能垒的累加贡献。此外,对水网络的分子间振动的分析表明,在膜附近的水运动受阻会使振动模式转移到更高的频率,我们用来确定从膜表面到大量水的熵梯度。我们的结果对脂质膜表面发生的过程具有影响,包括分子识别,结合和蛋白质-蛋白质相互作用。

著录项

  • 来源
    《Journal of the American Chemical Society》 |2016年第36期|11526-11535|共10页
  • 作者单位

    Center for Theoretical Chemistry, Faculty of Chemistry and Biochemistry, Ruhr-University, 44780 Bochum, Germany;

    Center for Theoretical Chemistry, Faculty of Chemistry and Biochemistry, Ruhr-University, 44780 Bochum, Germany,Max-Planck Institut fuer Kohlenforschung, 45470 Muelheim an der Ruhr, Germany;

    Department of Chemistry and Biochemistry and Department of Chemical Engineering, University of California, Santa Barbara, Santa Barbara, California 93106, United States;

    Department of Biochemistry and Molecular Biology, Zilkha Neurogenetic Institute, Keck School of Medicine, University of Southern California, Los Angeles, California 90089, United States;

    Department of Biochemistry and Molecular Biology, Zilkha Neurogenetic Institute, Keck School of Medicine, University of Southern California, Los Angeles, California 90089, United States;

    Max-Planck Institut fuer Kohlenforschung, 45470 Muelheim an der Ruhr, Germany;

    Department of Chemistry and Biochemistry and Department of Chemical Engineering, University of California, Santa Barbara, Santa Barbara, California 93106, United States;

    Center for Theoretical Chemistry, Faculty of Chemistry and Biochemistry, Ruhr-University, 44780 Bochum, Germany;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

  • 入库时间 2022-08-18 03:08:55

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号