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首页> 外文期刊>Journal of Grid Computing >COMPCHEM: Progress Towards GEMS a Grid Empowered Molecular Simulator and Beyond
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COMPCHEM: Progress Towards GEMS a Grid Empowered Molecular Simulator and Beyond

机译:COMPCHEM:GEMS在网格支持的分子模拟器及其他方面的进展

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摘要

Foundations and structure of the building blocks of GEMS, the ab initio molecular simulator designed for implementation on the EGEE computing Grid, are analyzed. The impact of the computational characteristics of the codes composing its blocks (the calculation of the ab initio potential energy values, the integration of the dynamics equations of the nuclear motion, and the statistical averaging of microscopic information to evaluate the relevant observable properties) on their Grid implementation when using rigorous ab initio quantum methods are discussed. The requests prompted by this approach for new computational developments are also examined by considering the present implementation of the simulator that is specialized in atom diatom reactive exchange processes.
机译:分析了GEMS构建基块的基础和结构,该结构是为在EEEE计算网格上实施而设计的从头算分子模拟器。组成其块的代码的计算特性(从头算势能值的计算,核运动动力学方程的积分以及微观信息的统计平均以评估相关的可观察特性)的影响讨论了使用严格的从头算子方法的网格实现。通过考虑专门用于原子硅藻反应交换过程的模拟器的当前实现,还检查了这种方法对新的计算开发提出的要求。

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