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Mapping Solvation Dynamics at the Function Site of Flavodoxin in Three Redox States

机译:三种氧化还原状态下黄酮毒素功能位点的溶剂化动力学

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Flavoproteins are unique redox coenzymes, and the dynamic solvation at their function sites is critical to the understanding of their electron-transfer properties. Here, we report our complete characterization of the function-site solvation of holoflavodoxin in three redox states and of the binding-site solvation of apoflavodoxin. Using intrinsic flavin cofactor and tryptophan residue as the local optical probes with two site-specific mutations, we observed distinct ultrafast solvation dynamics at the function site in the three states and at the related recognition site of the cofactor, ranging from a few to hundreds of picoseconds. The initial ultrafast motion in 1−2.6 ps reflects the local water-network relaxation around the shallow, solvent-exposed function site. The second relaxation in 20−40 ps results from the coupled local water−protein fluctuation. The third dynamics in hundreds of picoseconds is from the intrinsic fluctuation of the loose loops flanking the cofactor at the function site. These solvation dynamics with different amplitudes well correlate with the redox states from the oxidized form, to the more rigid semiquinone and to the much looser hydroquinone. This observation of the redox control of local protein conformation plasticity and water network flexibility is significant, and such an intimate relationship is essential to the biological function of interprotein electron transfer.
机译:黄素蛋白是独特的氧化还原辅酶,其功能位点的动态溶剂化对于理解其电子传递特性至关重要。在这里,我们报告我们在三个氧化还原状态中的全黄酮功能位点溶剂化和载脂蛋白的结合位点溶剂化的完整表征。使用固有的黄素辅因子和色氨酸残基作为具有两个位点特异性突变的局部光学探针,我们在三种状态下的功能位点和辅因子的相关识别位点观察到了不同的超快溶剂化动力学,范围从几到数百个皮秒。最初的1-2.6 ps的超快运动反映了浅水,溶剂暴露的功能部位周围的局部水网络松弛。 20-40 ps内的第二次松弛是由耦合的局部水-蛋白质波动引起的。数百皮秒内的第三个动力学是在功能位点辅因子旁的松散环的固有波动引起的。这些具有不同幅度的溶剂化动力学与从氧化形式到更刚性的半醌和更松散的对苯二酚的氧化还原态密切相关。氧化还原控制局部蛋白质构象可塑性和水网络柔性的这种观察是重要的,并且这种亲密关系对于蛋白质间电子转移的生物学功能是必不可少的。

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