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Systematic screening of lysyl oxidase-like (LOXL) family genes demonstrates that LOXL2 is a susceptibility gene to intracranial aneurysms

机译:对赖氨酰氧化酶样(LOXL)家族基因的系统筛选表明LOXL2是颅内动脉瘤的易感基因。

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摘要

Four lysyl oxidase family genes (LOXL1, LOXL2, LOXL3, and LOXL4), which catalyze cross-linking of collagen and elastin, were considered to be functional candidates for intracranial aneurysms (IA) and were extensively screened for genetic susceptibility in Japanese IA patients. Total RNA was isolated from four paired ruptured IA and superficial temporal artery (STA) tissue and examined by real-time RT-PCR. The expression of LOXL2 in the paired IA and STA tissues was elevated in the IA tissue. A total of 55 single nucleotide polymorphisms (SNPs) of LOXL1-4 were genotyped for an allelic association study in 402 Japanese IA patients and 462 Japanese non-IA controls. Allelic associations were evaluated with the chi-square test and the permutation test especially designed for adjustment of multiple testing. SNPs of LOXL1 and LOXL4 were not significantly associated with IA, while several SNPs of LOXL2 and LOXL3 showed nominally significant associations in IA patients. We detected an empirically significant association with one SNP of LOXL2 in familial IA patients after adjustment for multiple testing [χ 2 = 10.23, empirical P = 0.023, OR (95% CI) = 1.49 (1.17, 1.90)]. Furthermore, multilocus interaction was evaluated by multifactor dimensionality reduction analysis. We found that the SNPs of LOXL2 have an interactive effect with elastin (ELN) and LIM kinase 1 (LIMK1) that have been previously found to be associated with IA. In conclusion, one SNP of LOXL2 showed a significant association with IA individually, and we also detected a gene–gene interaction of LOXL2 with ELN/LIMK1, which may play an important role in susceptibility to IA.
机译:催化胶原和弹性蛋白交联的四个赖氨酰氧化酶家族基因(LOXL1,LOXL2,LOXL3和LOXL4)被认为是颅内动脉瘤(IA)的功能候选者,并广泛筛选了日本IA患者的遗传易感性。从四对破裂的IA和颞浅动脉(STA)组织中分离总RNA,并通过实时RT-PCR进行检查。 LOXL2在成对的IA和STA组织中的表达在IA组织中升高。共对LOXL1-4的55个单核苷酸多态性(SNP)进行了基因分型,以用于402位日本IA患者和462位日本非IA对照的等位基因关联研究。用卡方检验和专为调整多重检验而设计的置换检验评估等位基因的关联。 LOXL1和LOXL4的SNP与IA没有显着相关性,而LOXL2和LOXL3的几个SNP在IA患者中显示出名义上的显着相关性。经过多项测试调整后,我们在家族性IA患者中发现与LOXL2的一个SNP的经验显着相关[χ2 = 10.23,经验P = 0.023,或(95%CI)= 1.49(1.17,1.90)]。此外,通过多维度降维分析评估了多位点相互作用。我们发现LOXL2的SNP与弹性蛋白(ELN)和LIM激酶1(LIMK1)具有交互作用,以前已经发现它们与IA相关。总之,LOXL2的一个SNP分别与IA显着相关,我们还检测到LOXL2与ELN / LIMK1的基因-基因相互作用,这可能在IA易感性中起重要作用。

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  • 来源
    《Human Genetics》 |2007年第4期|377-387|共11页
  • 作者单位

    Division of Genetic Diagnosis Institute of Medical Science University of Tokyo Tokyo Japan;

    Division of Genetic Diagnosis Institute of Medical Science University of Tokyo Tokyo Japan;

    Division of Genetic Diagnosis Institute of Medical Science University of Tokyo Tokyo Japan;

    Division of Genetic Diagnosis Institute of Medical Science University of Tokyo Tokyo Japan;

    Division of Genetic Diagnosis Institute of Medical Science University of Tokyo Tokyo Japan;

    Department of Neurosurgery Neurological Institute Tokyo Women’s Medical University Tokyo Japan;

    Department of Neurosurgery Neurological Institute Tokyo Women’s Medical University Tokyo Japan;

    Department of Neurosurgery School of Medicine Chiba University Chiba Japan;

    Department of Neurosurgery School of Medicine Chiba University Chiba Japan;

    Department of Public Health School of Medicine Chiba University Chiba Japan;

    Tokyo Metropolitan Fuchu Hospital Fuchu Japan;

    Division of Genetic Diagnosis Institute of Medical Science University of Tokyo Tokyo Japan;

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