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Evolution of grid-based services for Diffusion Tensor Image analysis

机译:用于扩散张量图像分析的基于网格的服务的发展

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摘要

Analyzing Diffusion Tensor Image data of the human brain of large study groups is complex and demands new, sophisticated and computationally intensive pipelines that can efficiently be executed. We present our progress over the past five years in the development and porting of the DTI analysis pipeline to a grid infrastructure. Starting with simple jobs submitted from the command-line, we moved towards a workflow-based implementation and finally into the e-Biolnfra Gateway, which offers a web interface for the execution of selected biomedical data analysis software on the Dutch Grid. This gateway is currently being actively used by neuroscientists and for educational purposes.
机译:分析大型研究小组的人脑扩散张量图像数据非常复杂,需要能够有效执行的新的,复杂的和计算密集型管道。我们将介绍过去五年在DTI分析管道的开发和移植到网格基础设施方面的进展。从从命令行提交的简单作业开始,我们转向基于工作流的实施,最后进入e-Biolnfra网关,该网关提供了用于在Dutch Grid上执行选定的生物医学数据分析软件的Web界面。神经科学家目前正在积极地使用该网关并将其用于教育目的。

著录项

  • 来源
    《Future generation computer systems》 |2012年第8期|p.1194-1204|共11页
  • 作者单位

    Department of Radiology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands,Department of Imaging Science and Technology (Quantitative Imaging Group), Delft University of Technology, Delft, The Netherlands Department of Radiology, Academic Medical Center,Meibergdreef 9, 1105 AZ Amsterdam, The Netherlands;

    Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands;

    Department of Radiology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands,Department of Imaging Science and Technology (Quantitative Imaging Group), Delft University of Technology, Delft, The Netherlands;

    Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands,Biosystems Data Analysis group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands;

    Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    diffusion tensor imaging; grid computing; e-science; workflow; e-infrastructure; grid front-end; medical imaging; scientific gateway;

    机译:扩散张量成像网格计算;电子科学工作流程电子基础设施网格前端;医学影像;科学门户;
  • 入库时间 2022-08-18 02:17:02

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