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Insights into the evolutionary history of the vertebrate zic3 locus from a teleost-specific zic6 gene in the zebrafish, Danio rerio

机译:从斑马鱼Danio rerio中的硬骨鱼特异性zic6基因洞悉脊椎动物zic3基因座的进化历史

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摘要

The Zic gene family of zinc-finger transcription factors includes five orthologues, zic1–5, that are common to the Euteleostian vertebrates (fish, frogs, birds, and mammals). The Zic genes have been implicated as regulators of a number of critical developmental processes, including neurulation, neuronal differentiation, neural crest specification, the establishment of left–right asymmetry, and regulation of cell proliferation. The different Zic genes encode proteins that are expressed in broadly overlapping spatial domains, have conserved DNA-binding domains that recognize a common motif, are capable of physical interactions, and can co-regulate one another’s transcription. Thus, the transcriptional regulation of individual proteins and their effects on downstream targets must be assessed within the context of co-expression with other family members. We describe a novel gene, zic6, that is specific to the teleost fishes and lacks the lateral and rostral expression domains typical of the other Zic family members. We present evidence that zic6 is an ancestral locus arising by chromosomal duplication early in the Euteleostomi that was subsequently lost in the terrestrial vertebrates.
机译:锌指转录因子的Zic基因家族包括五个直向同源物zic1-5,这是Euteleostian脊椎动物(鱼类,青蛙,鸟类和哺乳动物)共有的。 Zic基因被认为是许多关键发育过程的调控因子,包括神经调节,神经元分化,神经c规范,左右不对称性的建立以及细胞增殖的调控。不同的Zic基因编码在广泛重叠的空间域中表达的蛋白质,具有保守的DNA结合域,可以识别共同的基序,能够进行物理相互作用,并且可以共同调节彼此的转录。因此,必须在与其他家族成员共表达的背景下评估单个蛋白质的转录调控及其对下游靶标的影响。我们描述了一种新基因zic6,该基因特定于硬骨鱼,并且缺乏其他Zic家族成员典型的侧向和侧向表达域。我们提供的证据表明zic6是由Euteleostomi中早期染色体复制引起的祖先基因座,随后在陆地脊椎动物中丢失。

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