Comparisons of normalization methods for relative quantitative in real-time polymerase chain reaction

摘要

The real-time polymerase chain reaction (rtPCR) provides sensitive and accurate quantitative results and becomes a widespread technique in analyzing gene expressions. House-keeping genes are required as references to normalize data of target genes, which may be unstable. This normalization process is similar to the normalization in analyzing high-density oligonucleotide arrays. This article evaluates the feasibility of normalizations for high-density oligonucleotide arrays to normalize data collected in rtPCR experiments. Since data features are different, simulations are used to evaluate the performance of these normalizations to rtPCR data based on five indices. Their feasibilities are illustrated by a rtPCR data.