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Genetic network inference as a series of discrimination tasks

机译:遗传网络推理是一系列歧视任务

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摘要

Motivation: Genetic network inference methods based on sets of differential equations generally require a great deal of time, as the equations must be solved many times. To reduce the computational cost, researchers have proposed other methods for inferring genetic networks by solving sets of differential equations only a few times, or even without solving them at all. When we try to obtain reasonable network models using these methods, however, we must estimate the time derivatives of the gene expression levels with great precision. In this study, we propose a new method to overcome the drawbacks of inference methods based on sets of differential equations.
机译:动机:基于微分方程组的遗传网络推理方法通常需要大量时间,因为必须多次求解方程。为了降低计算成本,研究人员提出了其他方法来推断遗传网络,方法是仅求解几次微分方程组,甚至根本不求解它们。但是,当我们尝试使用这些方法获得合理的网络模型时,必须非常精确地估计基因表达水平的时间导数。在这项研究中,我们提出了一种新的方法来克服基于微分方程组的推理方法的缺点。

著录项

  • 来源
    《Bioinformatics》 |2009年第7期|p.918-925|共8页
  • 作者单位

    1Graduate School of Engineering, Tottori University, 4-101, Koyama-minami, 2Faculty of Engineering, Tottori University, 4-101, Koyama-minami, Tottori 680-8552 and 3Advanced Science Institute, RIKEN, 1-7-22 Suehiro-cho, Tsurumi, Yokohama 230-0045, Japan;

  • 收录信息 美国《科学引文索引》(SCI);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
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