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Can Identification of a Fourth Domain of Life Be Made from Sequence Data Alone, and Could It Be Done on Mars?

机译:是否可以仅通过序列数据来识别生命的第四域,并且可以在火星上完成?

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A central question in astrobiology is whether life exists elsewhere in the universe. If so, is it related to Earth life? Technologies exist that enable identification of DNA- or RNA-based mi-crobial life directly from environmental samples here on Earth. Such technologies could, in principle, be applied to the search for life elsewhere; indeed, efforts are underway to initiate such a search. However, surveying for nucleic acid-based life on other planets, if attempted, must be carried out with caution, owing to the risk of contamination by Earth-based life. Here we argue that the null hypothesis must be that any DNA discovered and sequenced from samples taken elsewhere in the universe are Earth-based contaminants. Experience from studies of low-biomass ancient DNA demonstrates that some results, by their very nature, will not enable complete rejection of the null hypothesis. In terms of eliminating contamination as an explanation of the data, there may be value in identification of sequences that lie outside the known diversity of the three domains of life. We therefore have examined whether a fourth domain could be readily identified from environmental DNA sequence data alone. We concluded that, even on Earth, this would be far from trivial, and we illustrate this point by way of examples drawn from the literature. Overall, our conclusions do not bode well for planned PCR-based surveys for life on Mars, and we argue that other independent biosignatures will be essential in corroborating any claims for the presence of life based on nucleic acid sequences.
机译:天体生物学的一个中心问题是生命是否存在于宇宙的其他地方。如果是这样,这与地球生命有关吗?现有的技术可以直接从地球上的环境样本中识别基于DNA或RNA的微生物生命。这些技术原则上可以用于寻找其他地方的生命;实际上,正在努力进行这种搜索。但是,如果尝试进行其他行星上基于核酸的生命调查,由于存在地球生命被污染的风险,因此必须谨慎进行。在这里,我们认为零假设必须是从宇宙中其他地方发现的样本中发现和测序的任何DNA都是基于地球的污染物。对低生物量古代DNA的研究经验表明,就其本质而言,某些结果将无法完全否定原假设。就消除污染作为对数据的解释而言,在识别生命的三个域的已知多样性之外的序列方面可能具有价值。因此,我们检查了是否可以仅从环境DNA序列数据中轻松鉴定出第四域。我们得出的结论是,即使在地球上,这也不是一件容易的事,并且我们通过引用文献中的例子来说明这一点。总体而言,我们的结论对于计划中的基于PCR的火星生命调查并不为好,我们认为,其他独立的生物特征对于证实任何基于核酸序列的生命证据至关重要。

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