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Genetic and Expression Analysis of COPI Genes and Alzheimer’s Disease Susceptibility

机译:COPI基因的遗传和表达分析与阿尔茨海默氏病易感性

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摘要

Alzheimer’s disease (AD) is the most common neurodegenerative disease in the elderly and the leading cause of dementia in humans. Evidence shows that cellular trafficking and recycling machineries are associated with AD risk. A recent study found that the coat protein complex I (COPI)–dependent trafficking in vivo could significantly reduce amyloid plaques in the cortex and hippocampus of neurological in the AD mouse models and identified 12 single-nucleotide polymorphisms in COPI genes to be significantly associated with increased AD risk using 6,795 samples. Here, we used a large-scale GWAS dataset to investigate the potential association between the COPI genes and AD susceptibility by both SNP and gene-based tests. The results showed that only rs9898218 was associated with AD risk with P = 0.017. We further conducted an expression quantitative trait loci (eQTLs) analysis and found that rs9898218 G allele was associated with increased COPZ2 expression in cerebellar cortex with P = 0.0184. Importantly, the eQTLs analysis in whole blood further indicated that 11 of these 12 genetic variants could significantly regulate the expression of COPI genes. Hence, these findings may contribute to understand the association between COPI genes and AD susceptibility.
机译:阿尔茨海默氏病(AD)是老年人中最常见的神经退行性疾病,也是人类痴呆症的主要原因。有证据表明,蜂窝运输和回收设备与AD风险有关。一项最新研究发现,依赖外壳蛋白复合物I(COPI)的体内运输可以显着减少AD小鼠模型神经系统皮质和海马中的淀粉样斑块,并确定COPI基因中的12个单核苷酸多态性与使用6,795个样本增加了AD风险。在这里,我们使用了大型GWAS数据集,通过SNP和基于基因的测试来研究COPI基因与AD易感性之间的潜在关联。结果显示,只有rs9898218与AD风险相关,P = 0.017。我们进一步进行了表达数量性状基因座(eQTL)分析,发现rs9898218 G等位基因与小脑皮层中COPZ2表达增加相关,P = 0.0184。重要的是,全血中的eQTL分析进一步表明,这12个遗传变异中的11个可以显着调节COPI基因的表达。因此,这些发现可能有助于理解COPI基因与AD易感性之间的关联。

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