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Data-Driven Modeling for Precision Medicine in Pediatric Acute Liver Failure

机译:小儿急性肝衰竭的精准医学数据驱动建模

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摘要

The absence of early outcome biomarkers for pediatric acute liver failure (PALF) hinders medical and liver transplant decisions. We sought to define dynamic interactions among circulating inflammatory mediators to gain insights into PALF outcome subgroups. Serum samples from 101 participants in the PALF study, collected over the first 7 d following enrollment, were assayed for 27 inflammatory mediators. Outcomes (spontaneous survivors [S, n = 61], nonsurvivors [NS, n = 12] and liver transplant patients [LTx, n = 28]) were assessed at 21 d post-enrollment. Dynamic interrelations among mediators were defined using data-driven algorithms. Dynamic Bayesian network inference identified a common network motif, with HMGB1 as a central node in all patient subgroups. The networks in S and LTx were similar, and differed from NS. Dynamic network analysis suggested similar dynamic connectivity in S and LTx, but a more highly interconnected network in NS that increased with time. A dynamic robustness index calculated to quantify how inflammatory network connectivity changes as a function of correlation stringency differentiated all three patient subgroups. Our results suggest that increasing inflammatory network connectivity is associated with nonsurvival in PALF and could ultimately lead to better patient outcome stratification.
机译:小儿急性肝衰竭(PALF)缺乏早期结果生物标志物阻碍了医学和肝移植的决策。我们试图定义循环的炎症介质之间的动态相互作用,以获取对PALF结果亚组的见解。在入组后的前7天,从PALF研究的101名参与者的血清样本中分析了27种炎症介质。在入组后21 d评估结局(自发存活者[S,n = 61],非存活者[NS,n = 12]和肝移植患者[LTx,n = 28])。中介者之间的动态相互关系是使用数据驱动算法定义的。动态贝叶斯网络推论确定了一个常见的网络主题,其中HMGB1是所有患者亚组的中心节点。 S和LTx中的网络相似,并且与NS不同。动态网络分析表明,S和LTx具有相似的动态连接性,但NS中互连性更高的网络随时间增加。动态健壮指数计算得出,以量化炎症网络连通性如何根据相关严格性变化来区分所有三个患者亚组。我们的结果表明,炎症性网络连接性的增加与PALF的非生存性相关,最终可能导致更好的患者预后分层。

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