首页> 美国卫生研究院文献>Journal of Clinical Microbiology >Bloodstream Infections Due to Trichosporon spp.: Species Distribution Trichosporon asahii Genotypes Determined on the Basis of Ribosomal DNA Intergenic Spacer 1 Sequencing and Antifungal Susceptibility Testing
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Bloodstream Infections Due to Trichosporon spp.: Species Distribution Trichosporon asahii Genotypes Determined on the Basis of Ribosomal DNA Intergenic Spacer 1 Sequencing and Antifungal Susceptibility Testing

机译:毛状孢子菌引起的血流感染:物种分布核糖体DNA间隔基因1测序和抗真菌药敏试验的基础上确定的毛孢孢子基因型

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摘要

The reevaluation of the genus Trichosporon has led to the replacement of the old taxon Trichosporon beigelii by six new species. Sequencing of the ribosomal DNA (rDNA) intergenic spacer 1 (IGS1) is currently mandatory for accurate Trichosporon identification, but it is not usually performed in routine laboratories. Here we describe Trichosporon species distribution and prevalence of Trichosporon asahii genotypes based on rDNA IGS1 sequencing as well as antifungal susceptibility profiles of 22 isolates recovered from blood cultures. The clinical isolates were identified as follows: 15 T. asahii isolates, five Trichosporon asteroides isolates, one Trichosporon coremiiforme isolate, and one Trichosporon dermatis isolate. We found a great diversity of different species causing trichosporonemia, including a high frequency of isolation of T. asteroides from blood cultures that is lower than that of T. asahii only. Regarding T. asahii genotyping, we found that the majority of our isolates belonged to genotype 1 (86.7%). We report the first T. asahii isolate belonging to genotype 4 in South America. Almost 50% of all T. asahii isolates exhibited amphotericin B MICs of ≥2 μg/ml. Caspofungin MICs obtained for all the Trichosporon sp. isolates tested were consistently high (MICs ≥ 2 μg/ml). Most isolates (87%) had high MICs for 5-flucytosine, but all of them were susceptible to triazoles, markedly to voriconazole (all MICs ≤ 0.06 μg/ml).
机译:对Trichosporon属的重新评估导致用六个新物种替代了旧的分类单元Trichosporon Beimilii。核糖体DNA(rDNA)基因间隔区1(IGS1)的测序目前对于准确的Trichosporon鉴定是必不可少的,但通常在常规实验室中不进行。在这里,我们描述了基于rDNA IGS1测序的Trichosporon asahii基因型的Trichosporon物种分布和流行度,以及从血液培养物中回收的22种分离株的抗真菌敏感性。临床分离株的鉴定如下:15株天青木霉菌分离株,5种小孢子孢子菌分离株,1种纤毛孢子菌分离株和1种皮肤癣菌分离株。我们发现引起毛滴虫病的不同物种的多样性很大,包括从血液培养物中分离出T. asteroids的频率很高,低于仅T. asahii。关于麻疯树的基因分型,我们发现我们的大多数分离株属于基因型1(86.7%)。我们报告了南美第一个属于基因型4的T. asahii分离株。在所有的T. asahii分离株中,几乎有50%的两性霉素B MIC≥2μg/ ml。所有Trichosporon sp。获得的卡泊芬净MIC。测试的分离株始终很高(MIC≥2μg/ ml)。大多数分离物(87%)对5-氟胞嘧啶的MIC较高,但所有菌株均易受三唑类药物的侵袭,对伏立康唑敏感(所有MIC≤0.06μg/ ml)。

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