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Transcriptome Characterization of Reverse Development in Turritopsis dohrnii (Hydrozoa Cnidaria)

机译:虾仁逆向发育的转录组表征(HydrozoaCnidaria)

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摘要

Medusae of undergo reverse development in response to physical damage, adverse environmental conditions, or aging. Senescent, weakened or damaged medusae transform into a cluster of poorly differentiated cells (known as the cyst stage), which metamorphose back into a preceding life cycle stage, the polyp. During the metamorphosis, cell transdifferentiation occurs. The cyst represents the intermediate stage between a reverting medusa and a healthy polyp, during which cell transdifferentiation and tissue reorganization take place. Here we characterize and compare the transcriptomes of the polyp and newborn medusa stages of with that of the cyst, to identify biological networks potentially involved in the reverse development and transdifferentiation processes. The polyp, medusa and cyst of were sequenced through Illumina RNA-sequencing and assembled using a approach, resulting in 92,569, 74,639 and 86,373 contigs, respectively. The transcriptomes were annotated and comparative analyses among the stages identified biological networks that were significantly over-and under-expressed in the cyst as compared to the polyp and medusa stages. Biological processes that occur at the cyst stage such as telomerase activity, regulation of transposable elements and DNA repair systems, and suppression of cell signaling pathways, mitotic cell division and cellular differentiation and development may be involved in ’s reverse development and transdifferentiation. Our results are the first attempt to understand ’s life-cycle reversal at the genetic level, and indicate possible avenues of future research on developmental strategies, cell transdifferentiation, and aging using as a non-traditional system.
机译:美杜莎(Medusae)会因物理损坏,不利的环境条件或老化而逆向发展。衰老,衰弱或受损的美杜莎会转变成一群分化差的细胞(称为囊肿期),这些细胞会变态回到先前的生命周期阶段,即息肉。在变态过程中,发生细胞转分化。囊肿代表水母恢复和健康息肉之间的中间阶段,在此期间发生细胞转分化和组织重组。在这里,我们表征和比较息肉和新生水母的转录组与囊肿的转录组,以鉴定潜在参与反向发育和转分化过程的生物网络。通过Illumina RNA测序对息肉,水母和囊肿进行测序,并使用一种方法进行组装,分别得到92,569、74,639和86,373个重叠群。注释了转录组,并在各阶段之间进行了比较分析,发现与息肉和美杜莎阶段相比,在囊肿中明显过量表达和过度表达的生物网络。囊肿阶段发生的生物学过程,例如端粒酶活性,转座因子和DNA修复系统的调控,细胞信号通路的抑制,有丝分裂细胞分裂以及细胞分化和发育,都可能参与了反向发育和转分化。我们的结果是首次尝试在基因水平上了解生命周期逆转,并指出了将发育策略,细胞转分化和衰老用作非传统系统的未来研究的可能途径。

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