首页> 美国卫生研究院文献>Evolutionary Bioinformatics Online >Draft Genome Sequence of Pseudarthrobacterphenanthrenivorans Strain MHSD1 a Bacterial Endophyte IsolatedFrom the Medicinal Plant Pellaea calomelanos
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Draft Genome Sequence of Pseudarthrobacterphenanthrenivorans Strain MHSD1 a Bacterial Endophyte IsolatedFrom the Medicinal Plant Pellaea calomelanos

机译:拟杆菌假基因组序列邻苯二酚MHSD1细菌内生菌来自药用植物Pellaea calomelanos

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摘要

strain MHSD1 is a bacterialendophyte isolated from sterilized leaves of , a medicinal plant capable of growing in aridenvironments. Here, we report the draft genome sequence and annotation of thisbacterial endophyte. The draft genome sequence of strain MHSD1 has 4 450 468 bp with a G + Ccontent of 65.30%. The National Center for Biotechnology Information ProkaryoticGenome Annotation Pipeline identified a total of 4004 protein-coding genes, 56genes coding for RNAs, and 82 pseudogenes. Biosynthesis pathways for variousphytohormones such as auxin, salicylic acid, ethylene, cytokinin, jasmonic acid,abscisic acid, and gibberellins were identified. Putative genes involved invarious characteristics of bacterial endophyte lifestyle such as transport,motility, adhesion, membrane proteins, secretion and delivery systems, plantcell wall modification, and detoxification were identified. Phylogenomicanalysis showed strain MHSD1 to be asubspecies of Sphe3.
机译:MHSD1菌株是细菌从能够在干旱中生长的药用植物的无菌叶分离的内生菌环境。在这里,我们报告基因组序列的草稿及其注释细菌内生菌。 MHSD1菌株的基因组草图序列具有4 450 468 bp的G + C含量为65.30%。国家生物技术信息原核中心基因组注释管道共鉴定了4004个蛋白质编码基因,其中56个编码RNA的基因和82个假基因。各种生物合成途径植物激素,例如植物生长素,水杨酸,乙烯,细胞分裂素,茉莉酸,鉴定了脱落酸和赤霉素。推定基因参与细菌内生菌生活方式的各种特征,例如运输,运动,粘附,膜蛋白,分泌和传递系统,植物确定了细胞壁修饰和排毒。植物学分析显示菌株MHSD1是Sphe3的亚种。

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