Automatic construction of metabolic models with enzyme constraints

机译：具有酶限制的代谢模型的自动构建

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Augmentation of the stoichiometric matrix with the sMOMENT approach. is the enzyme pool pseudo-metabolite and the enzyme-pool-delivering pseudo-reaction. stands for reaction , for metabolite ; is the number of reactions, the number of metabolites

机译：用sMOMENT方法增强化学计量矩阵。是酶库假代谢物和传递酶库的假反应。代表反应，代表代谢产物;是反应的数量，代谢物的数量

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期刊名称 BMC Bioinformatics
作者
Pavlos Stephanos Bekiaris; Steffen Klamt;
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作者单位

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年(卷),期 2020(21),-1
年度 2020
页码 -1
总页数 13
原文格式 PDF
正文语种
中图分类应用微生物学;生化遗传学;生化药理学;
关键词
Flux balance analysis;

机译：助焊剂平衡分析;
入库时间 2022-08-21 11:35:37

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专利

1. Automatic construction of metabolic models with enzyme constraints [J] . Pavlos Stephanos Bekiaris, Steffen Klamt BMC Bioinformatics . 2020,第1期

机译：酶限制自动构建代谢模型
2. Comparing metabolic network models based on genomic and automatically inferred enzyme information from Plasmodium and its human host to define drug targets in silico [J] . Fatumo Segun, Plaimas Kitiporn, Adebiyi Ezekiel, Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases . 2011,第1期

机译：比较基于疟原虫及其人类宿主的基因组和自动推断的酶信息的代谢网络模型，以定义计算机上的药物靶标
3. Comparing metabolic network models based on genomic and automatically inferred enzyme information from Plasmodium and its human host to define drug targets in silico [J] . Fatumo Segun, Plaimas Kitiporn, Adebiyi Ezekiel, Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases . 2011,第4期

机译：比较基于疟原虫及其人类宿主的基因组和自动推断的酶信息的代谢网络模型，以定义计算机上的药物靶标
4. CONSTRUCTION OF NOVEL METABOLIC PATHWAYS WITH ARTIFICIAL ENZYMES [C] . Akihiko Kondo, Tomokazu Shirai, Tomohisa Hasunuma, Conference on biochemical and molecular engineering . 2019

机译：用人工酶构建新的代谢途径
5. Mathematical Models of Blood Clot Deformation and Post-Translational Regulation of Enzymes in Metabolic Networks [D] . Britton, Samuel. 2020

机译：代谢网络中血凝凝块变形和翻译后调节的数学模型
6. A new benchmark illustrates that integration of geometric constraints inferred from enzyme reaction chemistry can increase enzyme active site modeling accuracy [O] . Steve J. Bertolani, Justin B. Siegel 2012

机译：一个新的基准表明，从酶反应化学推断出的几何约束的整合可以提高酶活性位点建模的准确性
7. Integration of Enzyme Constraints in a Genome-scale Metabolic Model of Aspergillus Niger Improves Phenotype Predictions [O] . Jingru Zhou, Yingping Zhuang, Jianye Xia 2021

机译：在Aspergillus niger的基因组级代谢模型中酶限制的整合改善了表型预测
8. Systems Biology Framework for Modeling Metabolic Enzyme Inhibition of Mycobacterium Tuberculosis [R] . Fang, X., Wallqvist, A., Reifman, J. 2009

机译：系统生物学框架建模代谢酶抑制结核分枝杆菌

Automatic construction of metabolic models with enzyme constraints

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