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Genomic Characterization of H14 Subtype Influenza A Viruses in New World Waterfowl and Experimental Infectivity in Mallards (Anas platyrhynchos)

机译:新世界水禽中H14亚型甲型流感病毒的基因组表征和野鸭的实验感染性(Anas platyrhynchos)

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摘要

Recent repeated isolation of H14 hemagglutinin subtype influenza A viruses (IAVs) in the New World waterfowl provides evidence to suggest that host and/or geographic ranges for viruses of this subtype may be expanding. In this study, we used genomic analyses to gain inference on the origin and evolution of H14 viruses in New World waterfowl and conducted an experimental challenge study in mallards (Anas platyrhynchos) to evaluate pathogenicity, viral replication, and transmissibility of a representative viral strain in a natural host species. Genomic characterization of H14 subtype IAVs isolated from New World waterfowl, including three isolates sequenced specifically for this study, revealed high nucleotide identity among individual gene segments (e.g. ≥95% shared identity among H14 HA gene segments). In contrast, lower shared identity was observed among internal gene segments. Furthermore, multiple neuraminidase subtypes were observed for H14 IAVs isolated in the New World. Gene segments of H14 viruses isolated after 2010 shared ancestral genetic lineages with IAVs isolated from wild birds throughout North America. Thus, genomic characterization provided evidence for viral evolution in New World waterfowl through genetic drift and genetic shift since purported introduction from Eurasia. In the challenge study, no clinical disease or lesions were observed among mallards experimentally inoculated with A/blue-winged teal/Texas/AI13-1028/2013(H14N5) or exposed via contact with infected birds. Titers of viral shedding for mallards challenged with the H14N5 IAV were highest at two days post-inoculation (DPI); however shedding was detected up to nine DPI using cloacal swabs. The distribution of viral antigen among mallards infected with H14N5 IAV was largely restricted to enterocytes lining the villi in the lower intestinal tract and in the epithelium of the bursa of Fabricius. Characterization of the infectivity of A/blue-winged teal/Texas/AI13-1028/2013(H14N5) in mallards provides support for similarities in viral replication and shedding as compared to previously described waterfowl-adapted, low pathogenic IAV strains in ducks.
机译:最近在新世界水禽中反复分离出H14血凝素亚型A型流感病毒(IAV),提供了证据表明该亚型病毒的宿主和/或地理范围可能正在扩大。在这项研究中,我们使用基因组分析来推断新世界水禽中H14病毒的起源和进化,并在野鸭(Anas platyrhynchos)中进行了实验性挑战研究,以评估致病性,病毒复制和代表性病毒株的传播性。天然寄主物种。从新大陆水禽中分离出的H14亚型IAV的基因组学特征,包括为该研究专门测序的三个分离株,揭示了各个基因片段之间的高核苷酸同一性(例如H14 HA基因片段中≥95%的共享同一性)。相反,在内部基因片段之间观察到较低的共享同一性。此外,在新大陆中分离出的H14 IAVs观察到多种神经氨酸酶亚型。 2010年后分离出的H14病毒的基因片段与分离自整个北美野生鸟类的IAV共享祖先的遗传谱系。因此,自从欧亚大陆引入以来,基因组表征为通过遗传漂移和遗传转移在新大陆水禽中的病毒进化提供了证据。在挑战研究中,在实验接种A /蓝翅小野鸭/ Texas / AI13-1028 / 2013(H14N5)或通过与感染禽类接触的野鸭中未观察到临床疾病或病变。在接种后两天(DPI),用H14N5 IAV攻击的野鸭病毒滴度最高。但是,使用泄殖腔拭子最多可检测到9个DPI脱落。在感染了H14N5 IAV的野鸭中,病毒抗原的分布在很大程度上局限于肠小肠内和Fabricius滑囊上皮内的肠上皮细胞。与先前描述的鸭适应水禽,低致病性IAV株相比,野鸭中A /蓝翅蓝绿色/ Texas / AI13-1028 / 2013(H14N5)的感染性表征为病毒复制和脱落的相似性提供了支持。

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