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Proteins S100A8 and S100A9 are potential biomarkers for renal cell carcinoma in the early stages: Results from a proteomic study integrated with bioinformatics analysis

机译:蛋白质S100A8和S100A9是早期肾细胞癌的潜在生物标志物:蛋白质组学研究结果与生物信息学分析相结合

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摘要

In order to investigate the two members of the EF-hand Ca2+ binding protein S100 family, S100A8 and S100A9, in renal cell carcinoma (RCC), serum samples were collected from patients with RCC, transitional cell carcinoma in the kidney, benign renal masses and normal controls. The samples were analyzed by isobaric tags for relative and absolute quantification technology to identify the differential expression of S100A8 and S100A9 in the respective groups. Hierarchical clustering analysis was then conducted for the samples and the relevant selected gene. The cross-platform analysis for the external validation was performed by means of The Cancer Genome Atlas database, containing the gene/microRNA expression pattern and clinical information of patients with RCC. Immunohistochemical staining was used to verify the expression of S100A8 and S100A9 in the four groups. As a result, serum and mRNA expression levels of S100A8 and S100A9 were found to be upregulated in patients with RCC compared with the other three groups, which was consistent with the result of the upregulated expression of mRNA levels in RCC tissue. The overexpression of S100A8 and S100A9 in cancer cells was also confirmed by immunohistochemistry. In addition, bioinformatics revealed that let-7, a microRNA formerly identified as an inhibiting factor of RCC was downregulated in RCC, which contrasted with S100A8. It was also complementary to the sequence at the 3′ untranslated region terminal of S100A8. Therefore, indicating that S100A8 and S100A9 may serve as biomarkers for the detection of RCC.
机译:为了研究肾细胞癌(RCC)中EF手Ca 2 + 结合蛋白S100家族的两个成员S100A8和S100A9,从RCC,移行细胞的患者中收集血清样品肾脏癌,良性肾脏肿块和正常对照。通过等压标签对样品进行相对和绝对定量技术分析,以鉴定各组中S100A8和S100A9的差异表达。然后对样品和相关的选定基因进行层次聚类分析。外部验证的跨平台分析通过The Cancer Genome Atlas数据库进行,该数据库包含基因/ microRNA表达模式和RCC患者的临床信息。免疫组织化学染色用于验证四组中S100A8和S100A9的表达。结果,与其他三组相比,RCC患者的血清和S100A8和S100A9的mRNA表达水平被上调,这与RCC组织中mRNA水平的表达上调的结果一致。免疫组织化学也证实了S100A8和S100A9在癌细胞中的过表达。此外,生物信息学揭示了let-7(一种以前被鉴定为RCC的抑制因子)在RCC中被下调,这与S100A8相反。它也与S100A8的3'非翻译区末端的序列互补。因此,表明S100A8和S100A9可以用作检测RCC的生物标记。

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