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Ecosystem biogeochemistry considered as a distributed metabolic network ordered by maximum entropy production

机译:生态系统生物地球化学被认为是按最大熵产生排序的分布式代谢网络

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摘要

We examine the application of the maximum entropy production principle for describing ecosystem biogeochemistry. Since ecosystems can be functionally stable despite changes in species composition, we use a distributed metabolic network for describing biogeochemistry, which synthesizes generic biological structures that catalyse reaction pathways, but is otherwise organism independent. Allocation of biological structure and regulation of biogeochemical reactions is determined via solution of an optimal control problem in which entropy production is maximized. However, because synthesis of biological structures cannot occur if entropy production is maximized instantaneously, we propose that information stored within the metagenome allows biological systems to maximize entropy production when averaged over time. This differs from abiotic systems that maximize entropy production at a point in space–time, which we refer to as the steepest descent pathway. It is the spatio-temporal averaging that allows biological systems to outperform abiotic processes in entropy production, at least in many situations. A simulation of a methanotrophic system is used to demonstrate the approach. We conclude with a brief discussion on the implications of viewing ecosystems as self-organizing molecular machines that function to maximize entropy production at the ecosystem level of organization.
机译:我们研究了最大熵产生原理在描述生态系统生物地球化学中的应用。由于尽管物种组成发生变化,生态系统在功能上也可以保持稳定,所以我们使用分布式代谢网络描述生物地球化学,该网络合成了催化反应途径的通用生物结构,但在其他方面却与生物无关。生物学结构的分配和生物地球化学反应的调节是通过解决熵最大的最优控制问题来确定的。但是,因为如果瞬时产生最大的熵产生,则不会发生生物结构的合成,因此,我们提出,当随时间平均后,存储在元基因组中的信息可使生物系统最大化熵产生。这不同于非生物系统,该系统在时空的某个点使熵产生最大化,我们称其为最陡的下降路径。至少在许多情况下,正是时空平均才使生物系统在熵产生中胜过非生物过程。甲烷营养系统的模拟用于证明该方法。我们以关于将生态系统视为自组织分子机器的含义的简短讨论作为结束,这些分子机器可在组织的生态系统级别发挥最大的熵产生作用。

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