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High-Throughput Genetic Screening of 51 Pediatric Cataract Genes Identifies Causative Mutations in Inherited Pediatric Cataract in South Eastern Australia

机译:高通量遗传筛查的51个儿科白内障基因确定了澳大利亚东南部遗传性儿科白内障的致病突变

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摘要

Pediatric cataract is a leading cause of childhood blindness. This study aimed to determine the genetic cause of pediatric cataract in Australian families by screening known disease-associated genes using massively parallel sequencing technology. We sequenced 51 previously reported pediatric cataract genes in 33 affected individuals with a family history (cases with previously known or published mutations were excluded) using the Ion Torrent Personal Genome Machine. Variants were prioritized for validation if they were predicted to alter the protein sequence and were absent or rare with minor allele frequency <1% in public databases. Confirmed mutations were assessed for segregation with the phenotype in all available family members. All identified novel or previously reported cataract-causing mutations were screened in 326 unrelated Australian controls. We detected 11 novel mutations in GJA3, GJA8, CRYAA, CRYBB2, CRYGS, CRYGA, GCNT2, CRYGA, and MIP; and three previously reported cataract-causing mutations in GJA8, CRYAA, and CRYBB2. The most commonly mutated genes were those coding for gap junctions and crystallin proteins. Including previous reports of pediatric cataract-associated mutations in our Australian cohort, known genes account for >60% of familial pediatric cataract in Australia, indicating that still more causative genes remain to be identified.
机译:小儿白内障是儿童失明的主要原因。这项研究旨在通过使用大规模平行测序技术筛选已知的疾病相关基因来确定澳大利亚家庭小儿白内障的遗传原因。我们使用Ion Torrent个人基因组机对33个有家族史的受影响个体进行了51个先前报道的小儿白内障基因测序(排除了先前已知或已发表的突变病例)。如果变体被预测会改变蛋白质序列,并且在公共数据库中不存在或罕见,且等位基因频率<1%,则优先进行验证。在所有可用的家庭成员中评估已确认的突变与表型的分离。在326个无关的澳大利亚对照中筛选了所有已鉴定出的新的或先前报道的引起白内障的突变。我们在GJA3,GJA8,CRYAA,CRYBB2,CRYGS,CRYGA,GCNT2,CRYGA和MIP中检测到11个新突变;以及先前报道的三个导致GJA8,CRYAA和CRYBB2的白内障致突变。最常见的突变基因是编码间隙连接和结晶蛋白的基因。包括我们澳大利亚队列中小儿白内障相关突变的先前报道,已知基因占澳大利亚家族性小儿白内障的60%以上,这表明仍有更多的致病基因有待确定。

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