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  • 1.

    【2hr】The effects of physicochemical variables and tadpole assemblages on microalgal communities in freshwater temporary ponds through an experimental approach

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    机译 通过实验方法，理化变量和t组合对淡水临时池中微藻群落的影响
    摘要：BackgroundIn freshwater systems, microalgae are the major biomass of microorganisms. They occur in ecosystems that are largely structured by the climatic regime, the physical and chemical environments with which they interact, and the biological interactions that occur within them. Amphibian larvae are most present in standing water habitats where they are important primary and secondary consumers and even predators. Studies conducted in America and Europe have shown that tadpoles play an important role in the regulation of the algal community structure and water quality in ecosystems. This article aimed to study the effects of the physicochemical variables and tadpole assemblages of four species on microalgae in artificial freshwater ponds using an experimental approach in the Pendjari area, a flora and fauna reserve located in the extreme north-west of Benin.
  • 2.

    【2hr】Molecular (PCR-DGGE) versus morphological approach: analysis of taxonomic composition of potentially toxic cyanobacteria in freshwater lakes

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    机译 分子（PCR-DGGE）与形态学方法：淡水湖泊中潜在毒性蓝细菌的生物分类组成分析
    摘要：BackgroundThe microscopic Utermöhl method is commonly used for the recognition of the presence and taxonomic composition of potentially toxic cyanobacteria and is especially useful for monitoring reservoirs used as drinking water, recreation and fishery resources. However, this method is time-consuming and does not allow potentially toxic and nontoxic cyanobacterial strains to be distinguished. We have developed a method based on denaturing gradient gel electrophoresis (DGGE) of the marker gene ITS and the mcy-gene cluster, and DNA sequencing. We have attempted to calibrate the DGGE-method with a microscopic procedure, using water samples taken in 2011 from four lakes of the Great Mazurian Lakes system.
  • 3.

    【2hr】Interactions of marine mammals and birds with offshore membrane enclosures for growing algae (OMEGA)

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    机译 海洋哺乳动物和鸟类与用于生长藻类的近海膜外壳的相互作用（OMEGA）
    摘要：BackgroundOMEGA is an integrated aquatic system to produce biofuels, treat and recycle wastewater, capture CO2, and expand aquaculture production. This system includes floating photobioreactors (PBRs) that will cover hundreds of hectares in marine bays. To assess the interactions of marine mammals and birds with PBRs, 9 × 1.3 m flat panel and 9.5 × 0.2 m tubular PBRs were deployed in a harbor and monitored day and night from October 10, 2011 to Janurary 22, 2012 using infrared video. To observe interactions with pinnipeds, two trained sea lions (Zalophus californianus) and one trained harbor seal (Phoca vitulina richardii) were observed and directed to interact with PBRs in tanks. To determine the forces required to puncture PBR plastic and the effects of weathering, Instron measurements were made with a sea otter (Enhydra lutris) tooth and bird beaks.
  • 4.

    【2hr】Analysis of β-N-methylamino-L-alanine (BMAA) in spirulina-containing supplements by liquid chromatography-tandem mass spectrometry

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    机译 液相色谱-串联质谱法分析含螺旋藻补品中的β-N-甲基氨基-L-丙氨酸（BMAA）
    摘要：Over the last decade the amino acid beta-N-methylamino-L-alanine (BMAA) has come under intense scrutiny. International laboratory and epidemiological research continues to support the hypothesis that environmental exposure to BMAA (e.g., through dietary practices, water supply) can promote the risk of various neurodegenerative diseases. A wide variety of cyanobacteria spp. have previously been reported to produce BMAA, with production levels dependent upon species, strain and environmental conditions. Since spirulina (Arthrospira spp.) is a member of the cyanobacteria phylum frequently consumed via dietary supplements, the presence of BMAA in such products may have public health implications. In the current work, we have analyzed ten spirulina-containing samples for the presence of BMAA; six pure spirulina samples from two separate raw materials suppliers, and four commercially-available multi-ingredient products containing 1.45 g of spirulina per 8.5 g serving. Because of controversy surrounding the measurement of BMAA, we have used two complementary liquid chromatography-tandem mass spectrometry (LC-MS/MS) methods: one based on reversed phase LC (RPLC) with derivatization and the other based on hydrophilic interaction LC (HILIC). Potential matrix effects were corrected for by internal standardization using a stable isotope labeled BMAA standard. BMAA was not detected at low limits of detection (80 ng/g dry weight) in any of these product samples. Although these results are reassuring, BMAA analyses should be conducted on a wider sample selection and, perhaps, as part of ongoing spirulina production quality control testing and specifications.
  • 5.

    【2hr】The Manx shearwater (Puffinus puffinus) as a candidate sentinel of Atlantic Ocean health

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    机译 Manx剪水（Puffinus puffinus）是大西洋健康的候选定点
    摘要：IntroductionSeabirds have been historically used to monitor environmental contamination. The aim of the present study was to test the suitability of a species belonging to the Procellariiformes group, the Manx shearwater, Puffinus puffinus, as a sentinel of environmental health, by determining contaminant levels (trace metals and organochlorine compounds) from carcass tissues and by isolating Vibrio spp. and Aeromonas spp. from live specimens. To this end, 35 Puffinus puffinus carcasses wrecked on the north-central coast of the state of Rio de Janeiro, Brazil, and two carcasses recovered in Aracruz, on the coast of the state of Espírito Santo, Brazil, were sampled, and fragments of muscle and hepatic tissues were collected for contaminant analyses. Swabs from eleven birds found alive at the north-central coast of Rio de Janeiro were collected for isolation of the aforementioned bacteria.
  • 6.

    【2hr】Molecular phylogenetic analysis of bacterial community and characterization of Cr(VI) reducers from the sediments of Tantloi hot spring, India

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    机译 印度坦特洛温泉沉积物中细菌群落的分子系统发育分析和Cr（VI）还原剂的表征
    摘要：BackgroundA geothermal ecosystem located at Tantloi, India has been found to be an interesting habitat for microbes of diverse nature. However, the microbial diversity of this habitat is poorly explored. In this study, a detailed phylogenetic study has been carried out to understand the bacterial diversity of this habitat and to identify prospective metal reducers using culture independent approach. The bacterial diversity of the sediments, which contain undetectable levels of Cr(VI), was analysed with respect to chromium reduction and the strains highly resistant to and efficiently reducing chromium under aerobic conditions were isolated and characterized.
  • 7.

    【2hr】In silico analysis of high affinity potassium transporter (HKT) isoforms in different plants

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    机译 不同植物中高亲和力钾转运蛋白（HKT）亚型的计算机分析
    摘要：BackgroundHigh affinity potassium transporters (HKTs) are located in the plasma membrane of the vessels and have significant influence on salt tolerance in some plants. They exclude Na+ from the parenchyma cells to reduce Na+ concentration. Despite many studies, the underlying regulatory mechanisms and the exact functions of HKTs within different genomic backgrounds are relatively unknown. In this study, various bioinformatics techniques, including promoter analysis, identification of HKT-surrounding genes, and construction of gene networks, were applied to investigate the HKT regulatory mechanism.
  • 8.

    【2hr】Molecular analysis of bacterial diversity in mudflats along the salinity gradient of an acidified tropical Bornean estuary (South East Asia)

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    机译 沿酸化热带婆罗洲河口（东南亚）盐度梯度进行滩涂细菌多样性的分子分析
    摘要：BackgroundThe Brunei River and Bay estuarine system (BES) in the northwest of Borneo is acidic and highly turbid. The system supports extensive intertidal mudflats and presents a potentially steep salinity and pH gradient along its length (45 km). Temporal variation in physical parameters is observed diurnally due to seawater flux during tidal forcing, and stochastically due to elevated freshwater inflow after rains, resulting in a salinity range between 0 and 34 psu. High velocity freshwater run-off from acid sulphate formations during monsoon seasons results in highly variable and acidic conditions (pH 4) at the upper reaches of the BES, whereas the pH is relatively stable (pH 8) at the seaward extremes, due to mixing with seawater from the South China Sea. At their surfaces, the BES mudflats present microbial ecosystems driven by oxygenic phototrophs. To study the effect of various physical parameters on the bacterial diversity of the BES mudflats, surface samples were collected from six sites stretching over 40 km for molecular and phylogentic analysis.
  • 9.

    【2hr】Benthic infaunal community structuring in an acidified tropical estuarine system

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    机译 酸化的热带河口系统中的底栖动物群落结构
    摘要：BackgroundRecent studies suggest that increasing ocean acidification (OA) should have strong direct and indirect influences on marine invertebrates. While most theory and application for OA is based on relatively physically-stable oceanic ecological systems, less is known about the effects of acidification on nearshore and estuarine systems. Here, we investigated the structuring of a benthic infaunal community in a tropical estuarine system, along a steep salinity and pH gradient, arising largely from acid-sulphate groundwater inflows (Sungai Brunei Estuary, Borneo, July 2011- June 2012).
  • 10.

    【2hr】A histopathological and biometric comparison between catfish (Pisces, Ariidae) from a harbor and a protected area, Brazil

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    机译 来自巴西港口和保护区的cat鱼（双鱼，A科）的组织病理学和生物统计学比较
    摘要：BackgroundHistopathological lesions and biometric variations in catfish species are statistically associated with chemical contaminant exposure. A histopathological and biometric database for the catfish Sciades herzbergii and Bagre bagre from São Luís Island (Port Area) and Caranguejos Island (Reference Area) is presented. Branchial and hepatic lesions were classified into three reaction patterns: 1) circulatory or inflammatory disturbances; 2) regressive changes; 3) progressive changes. This paper summarizes research efforts aimed at characterizing the biomonitoring potential of catfish from two islands in Brazil, which exhibit great habitat diversity and different levels of human intervention.
  • 11.

    【2hr】Efficient conversion of solar energy to biomass and electricity

    包量

    机译 高效将太阳能转化为生物质和电力
    摘要：The Earth receives around 1000 W.m−2 of power from the Sun and only a fraction of this light energy is able to be converted to biomass (chemical energy) via the process of photosynthesis. Out of all photosynthetic organisms, microalgae, due to their fast growth rates and their ability to grow on non-arable land using saline water, have been identified as potential source of raw material for chemical energy production. Electrical energy can also be produced from this same solar resource via the use of photovoltaic modules. In this work we propose a novel method of combining both of these energy production processes to make full utilisation of the solar spectrum and increase the productivity of light-limited microalgae systems. These two methods of energy production would appear to compete for use of the same energy resource (sunlight) to produce either chemical or electrical energy. However, some groups of microalgae (i.e. Chlorophyta) only require the blue and red portions of the spectrum whereas photovoltaic devices can absorb strongly over the full range of visible light. This suggests that a combination of the two energy production systems would allow for a full utilization of the solar spectrum allowing both the production of chemical and electrical energy from the one facility making efficient use of available land and solar energy. In this work we propose to introduce a filter above the algae culture to modify the spectrum of light received by the algae and redirect parts of the spectrum to generate electricity. The electrical energy generated by this approach can then be directed to running ancillary systems or producing extra illumination for the growth of microalgae. We have modelled an approach whereby the productivity of light-limited microalgae systems can be improved by at least 4% through using an LED array to increase the total amount of illumination on the microalgae culture.
  • 12.

    【2hr】Assessing environmental impacts of offshore wind farms: lessons learned and recommendations for the future

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    机译 评估海上风电场对环境的影响：经验教训和未来建议
    摘要：Offshore wind power provides a valuable source of renewable energy that can help reduce carbon emissions. Technological advances are allowing higher capacity turbines to be installed and in deeper water, but there is still much that is unknown about the effects on the environment. Here we describe the lessons learned based on the recent literature and our experience with assessing impacts of offshore wind developments on marine mammals and seabirds, and make recommendations for future monitoring and assessment as interest in offshore wind energy grows around the world. The four key lessons learned that we discuss are: 1) Identifying the area over which biological effects may occur to inform baseline data collection and determining the connectivity between key populations and proposed wind energy sites, 2) The need to put impacts into a population level context to determine whether they are biologically significant, 3) Measuring responses to wind farm construction and operation to determine disturbance effects and avoidance responses, and 4) Learn from other industries to inform risk assessments and the effectiveness of mitigation measures. As the number and size of offshore wind developments increases, there will be a growing need to consider the population level consequences and cumulative impacts of these activities on marine species. Strategically targeted data collection and modeling aimed at answering questions for the consenting process will also allow regulators to make decisions based on the best available information, and achieve a balance between climate change targets and environmental legislation.
  • 13.

    【2hr】Aquatic Biosystems reviewer acknowledgement 2013

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    机译 2013年水生生物系统审稿人致谢
    摘要：Contributing reviewersThe Aquatic Biosystems editorial team would like to thank the following colleagues who contributed to peer review for the journal in 2013.
  • 14.

    【2hr】High throughput screening of CO2-tolerating microalgae using GasPak bags

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    机译 使用GasPak袋高通量筛选耐CO2的微藻
    摘要：BackgroundMicroalgae are diverse in terms of their speciation and function. More than 35,000 algal strains have been described, and thousands of algal cultures are maintained in different culture collection centers. The ability of CO2 uptake by microalgae varies dramatically among algal species. It becomes challenging to select suitable algal candidates that can proliferate under high CO2 concentration from a large collection of algal cultures.
  • 15.

    【2hr】Gene encoding prolactin in cinnamon clownfish Amphiprion melanopus and its expression upon acclimation to low salinities

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    机译 肉桂小丑鱼Amphiprion melanopus中催乳素的编码基因及其在低盐适应条件下的表达。
    摘要：BackgroundProlactin (PRL) is a key hormone for osmoregulation in fish. Levels of PRL in the pituitary gland and plasma ion composition of clownfish seem to change to regulate their hydromineral balance during adaptation to waters of different salinities. In order to understand osmoregulatory mechanism and its association with growth performance and PRL in fish, the gene encoding PRL and its expression level in cinnamon clownfish Amphiprion melanopus upon acclimation to low salinity was analyzed.
  • 16.

    【2hr】Wastewater use in algae production for generation of renewable resources: a review and preliminary results

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    机译 藻类生产中产生可再生资源的废水利用：回顾和初步结果
    摘要：Microalgae feedstock production can be integrated with wastewater and industrial sources of carbon dioxide. This study reviews the literature on algae grown on wastewater and includes a preliminary analysis of algal production based on anaerobic digestion sludge centrate from the Howard F. Curren Advanced Wastewater Treatment Plant (HFC AWTP) in Tampa, Florida and secondary effluent from the City of Lakeland wastewater treatment facilities in Lakeland, Florida. It was demonstrated that a mixed culture of wild algae species could successfully be grown on wastewater nutrients and potentially scaled to commercial production. Algae have demonstrated the ability to naturally colonize low-nutrient effluent water in a wetland treatment system utilized by the City of Lakeland. The results from these experiments show that the algae grown in high strength wastewater from the HFC AWTP are light-limited when cultivated indoor since more than 50% of the outdoor illumination is attenuated in the greenhouse.An analysis was performed to determine the mass of algae that can be supported by the wastewater nutrients (mainly nitrogen and phosphorous) available from the two Florida cities. The study was guided by the growth and productivity data obtained for algal growth in the photobioreactors in operation at the University of South Florida. In the analysis, nutrients and light are assumed to be limited, while CO2 is abundantly available. There is some limitation on land, especially since the HFC AWTP is located at the Port of Tampa. The temperature range in Tampa is assumed to be suitable for algal growth year round. Assuming that the numerous technical challenges to achieving commercial-scale algal production can be met, the results presented suggest that an excess of 71 metric tons per hectare per year of algal biomass can be produced. Two energy production options were considered; liquid biofuels from feedstock with high lipid content, and biogas generation from anaerobic digestion of algae biomass. The total potential oil volume was determined to be approximately 337,500 gallons per year, which may result in the annual production of 270,000 gallons of biodiesel when 80% conversion efficiency is assumed. This production level would be able to sustain approximately 450 cars per year on average. Potential biogas production was estimated to be above 415,000 kg/yr, the equivalent of powering close to 500 homes for a year.
  • 17.

    【2hr】Indo-Pacific bottlenose dolphin (Tursiops aduncus) habitat preference in a heterogeneous, urban, coastal environment

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    机译 异质，城市，沿海环境中的印度太平洋宽吻海豚（Tursiops aduncus）栖息地偏好
    摘要：BackgroundLimited information is available regarding the habitat preference of the Indo-Pacific bottlenose dolphin (Tursiops aduncus) in South Australian estuarine environments. The need to overcome this paucity of information is crucial for management and conservation initiatives. This preliminary study investigates the space-time patterns of habitat preference by the Indo-Pacific bottlenose dolphin in the Port Adelaide River-Barker Inlet estuary, a South Australian, urbanised, coastal environment. More specifically, the study aim was to identify a potential preference between bare sand substrate and seagrass beds, the two habitat types present in this environment, through the resighting frequency of recognisable individual dolphins.
  • 18.

    【2hr】Bacterial diversity of the rock-water interface in an East Antarctic freshwater ecosystem, Lake Tawani(P)†

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    机译 塔瓦尼湖（P）的南极东部淡水生态系统中岩水界面的细菌多样性†
    摘要：Schirmacher Oasis is one of the few ice-free plateaus in East Antarctica that maintains a unique distribution of over 120 microbial-rich, dynamic freshwater lakes, most of which are unexplored. In this study, we describe the bacterial diversity of the rock-water interface in Lake Tawani(P) using culture-independent Bacterial Tag Encoded FLX Amplicon Pyrosequencing (bTEFAP), clone library construction, and culture-based analysis targeting the eubacterial 16S rRNA gene. Lake Tawani(P)was formed in a fossil valley by the accumulation of snow and glacial melt through surface channels into a low-catchment depression. Overall this lake exhibited thirteen bacterial phyla and one-hundred and twelve genera. The Qiime bioinformatics analysis on the bTEFAP alone exhibited higher coverage of the bacterial composition in Lake Tawani(P) than the clone library construction or culture-based methodology. Particularly due to the higher sensitivity of the bTEFAP approach, we detected and differentiated members of the phyla: Chloroflexi, Gemmatimonadetes, Planctomycetes, Nitrospira, and Candidate Division TM7 that other methods were unable to reveal. Nevertheless we found that the use of multiple approaches identified a more complete bacterial community than by using any single approach. Investigating the bacterial diversity of the Schirmacher Oasis lakes, especially those connected through surface channels and encompassed by valleys, will help unravel the dynamic nature of these unique seasonal, freshwater lakes, which potentially harbors highly adapted bacterial taxa with defined ecological functions.
  • 19.

    【2hr】The quantitative proteomic response of Synechocystis sp. PCC6803 to phosphate acclimation

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    机译 定量集胞藻的蛋白质组学反应。 PCC6803适应磷酸盐
    摘要：BackgroundInorganic phosphate (Pi) is a critical nutrient for all life and is periodically limiting in marine and freshwater provinces, yet little is understood how organisms acclimate to fluctuations in Pi within their environment. To investigate whole cell adaptation, we grew Synechocystis sp. PCC6803, a model freshwater cyanobacterium, in 3%, and 0.3% inorganic phosphate (Pi) media. The cells were allowed to acclimate over 60 days, and cells were harvested for quantitative high throughput mass spectrometry-based proteomics using the iTRAQ™ labelling technology.
  • 20.

    【2hr】Effects of flow restoration on mussel growth in a Wild and Scenic North American River

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    机译 流量恢复对野生和风景秀丽的北美河流贻贝生长的影响
    摘要：BackgroundFreshwater mussels remain among the most imperiled species in North America due primarily to habitat loss or degradation. Understanding how mussels respond to habitat changes can improve conservation efforts. Mussels deposit rings in their shell in which age and growth information can be read, and thus used to evaluate how mussels respond to changes in habitat. However, discrepancies between methodological approaches to obtain life history information from growth rings has led to considerable uncertainty regarding the life history characteristics of many mussel species. In this study we compared two processing methods, internal and external ring examination, to obtain age and growth information of two populations of mussels in the St. Croix River, MN, and evaluated how mussel growth responded to changes in the operation of a hydroelectric dam.
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