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Rare, De Novo and Common Variants in CARD14 in Psoriasis.

机译:牛皮癣的CARD14中的罕见,从无和常见变异。

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摘要

Psoriasis is a common, inflammatory disorder of the skin that is associated with arthritis in up to 30% of cases. Previously, PSORS2 (psoriasis susceptibility locus 2) was independently localized with linkage analysis to chromosomal region 17q25.3-qter in two families with multiple psoriasis-affected members. One family was of European ancestry; the second was from Taiwan. In caspase recruitment domain family, member 14 (CARD14), we identified unique gain-of-function mutations that segregated with psoriasis by using genomic capture and DNA sequencing. The mutations, c.349G>A (p.Gly117Ser; in the family of European descent) and c.349+5G>A (in the Taiwanese family), altered splicing between CARD14 exons 3 and 4. A de novo mutation in CARD14, c.413A>C (p.Glu138Ala), was detected in a child with severe, early-onset, generalized pustular psoriasis. We identified fifteen additional rare, missense variants in CARD14 and determined their distribution in seven psoriasis cohorts (>6,000 cases and >4,000 controls). There were more CARD14 rare variants in cases than in controls (burden test p value = 0.0015). CARD14 activates nuclear factor of kappa light chain enhancer in B-cells (NF-kB), and we determined the effects of variants on NF-kB activation and the transcriptome of keratinocytes. CARD14 variants led to a range of NFkB activities; putative pathogenic variants led to levels >2.5-fold higher than did wildtype CARD14. Transcriptome profiling of wild-type and variant CARD14 transfectants in keratinocytes differentiated probably pathogenic mutations from neutral variants such as polymorphisms. Over 20 CARD14 polymorphisms were also genotyped, and metaanalysis revealed an association between psoriasis and rs11652075 (c.2458C>T [p.Arg820Trp]; p value = 2.1x10-6). CARD14 is localized mainly in the basal layers of healthy skin epidermis, but in lesional psoriatic skin it is reduced in the basal layer and more diffusely upregulated in the suprabasal layers of the epidermis. We propose that, after a triggering event, rare gain-of-function mutations in CARD14 initiate a process that includes inflammatory cell recruitment by keratinocytes. This perpetuates a vicious cycle of epidermal inflammation and regeneration, which is the hallmark of psoriasis. These studies enhance our understanding of the genetics of psoriasis and illustrate the challenges faced in identifying pathogenic variants in common disease.
机译:银屑病是一种常见的皮肤炎性疾病,在多达30%的病例中与关节炎有关。以前,通过连锁分析将PSORS2(牛皮癣易感性基因座2)独立定位于两个受多个牛皮癣影响的成员的染色体区域17q25.3-qter。一个家庭有欧洲血统。第二个来自台湾。在胱天蛋白酶募集域家族成员14(CARD14)中,我们通过基因组捕获和DNA测序鉴定了与牛皮癣隔离的独特的功能获得性突变。 c.349G> A(p.Gly117Ser;在欧洲血统家族中)和c.349 + 5G> A(在台湾血统中)突变,改变了CARD14外显子3和4之间的剪接。在患有严重早发性脓疱型银屑病的儿童中检测到c.413A> C(p.Glu138Ala)。我们在CARD14中鉴定出15个其他稀有,错义变体,并确定了它们在7个牛皮癣人群中的分布(> 6,000例和> 4,000个对照)。病例中的CARD14稀有变种比对照组多(负担试验p值= 0.0015)。 CARD14激活B细胞(NF-kB)中κ轻链增强子的核因子,我们确定了变体对NF-kB激活和角质形成细胞转录组的影响。 CARD14变异导致了一系列NFkB活性;推定的致病变体导致的水平比野生型CARD14高2.5倍以上。角质形成细胞中野生型和变异CARD14转染子的转录组谱分析将可能的致病突变与中性变异(如多态性)区分开来。还对超过20种CARD14多态性进行了基因分型,荟萃分析显示银屑病与rs11652075之间存在关联(c.2458C> T [p.Arg820Trp]; p值= 2.1x10-6)。 CARD14主要位于健康皮肤表皮的基底层中,但在皮损性牛皮癣皮肤中,它在基底层的基底层中减少,并在表皮的基底上层中更加弥散地上调。我们建议,在触发事件之后,CARD14中罕见的功能获得突变会启动一个过程,其中包括角质形成细胞的炎症细胞募集。这使表皮炎症和再生的恶性循环永存,这是牛皮癣的标志。这些研究增强了我们对牛皮癣遗传学的理解,并说明了在识别常见疾病的致病变异方面面临的挑战。

著录项

  • 作者

    Jordan, Catherine Teresa.;

  • 作者单位

    Washington University in St. Louis.;

  • 授予单位 Washington University in St. Louis.;
  • 学科 Biology Genetics.
  • 学位 Ph.D.
  • 年度 2014
  • 页码 274 p.
  • 总页数 274
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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