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Drug binding to human alpha 1-acid glycoprotein.

机译:药物与人α1-酸糖蛋白结合。

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摘要

Many basic drugs are bound principally or in part by the lipocalin alpha 1-acid glycoprotein (AGP), and this influences their systemic pharmacology and toxicology. As AGP's peptide and glycan heterogeneity have confounded years of efforts to obtain an experimental structure, here the molecular determinants of drug-AGP interactions were investigated using two approaches. First, a homology model of the major (F1*S) variant was constructed. The model revealed two topographically plausible hydrophobic sites: inside the barrel fold and at an external cleft. Notable is a hydrophilic portal region, gated by two oppositely charged residues, restricting access to the barrel site. Second, a novel fluorescence quenching, F1*S variant-selective probe (DEDIC) was developed to measure AGP association with amphipathic amines (e.g. local anesthetics, antiarrythmics, antidepressants). Using DEDIC as a probe, structure-activity studies on local anesthetics demonstrated a positive correlation between drug hydrophobicity and affinity for F1*S. The importance of electrostatic factors was assessed by examining the pH-dependent binding of an ionizable local anesthetic, lidocaine. Uncharged lidocaine was found to bind with at least eight times the affinity of its protonated counterpart. While this result is consistent with our model (if it is assumed that drugs' amino termini are electrostatically repelled principally by the positively charged residue in the portal), it is inconsistent with a current, published model, positing only a negatively charged region at the base of the binding site that interacts favorably with cationic ligands. DEDIC-F1*S association kinetics were studied using stopped-flow spectrofluorometry, revealing a fast, unresolvable process (tau 1 msec) having an EC50 identical to that observed in equilibrium experiments for low affinity binding and several slower processes (tau = ca. 0.1 to 10 sec). Since binding to a sterically unencumbered cleft, as depicted by the model, should be near diffusion limited, the low affinity site was thereby assigned to the cleft region. The next fastest component exhibited an apparent rate that saturated at higher [DEDIC], consistent with the two-step mechanism for barrel binding predicted by the model: once the pre-association (portal) site saturates, barrel entry becomes rate limiting. The apparent high affinity site was therefore identified as the barrel site.
机译:许多基本药物主要或部分被脂环素α1-酸糖蛋白(AGP)结合,这影响了它们的全身药理学和毒理学。由于AGP的肽和聚糖的异质性困扰了多年努力来获得实验结构,因此在这里使用两种方法研究了药物与AGP相互作用的分子决定因素。首先,构建主要(F1 * S)变异体的同源性模型。该模型显示了两个在地形上似乎合理的疏水位点:在桶褶皱内部和在外部裂缝处。值得注意的是一个亲水的门户区域,由两个带相反电荷的残基控制,限制了进入枪管的位置。其次,开发了一种新型的荧光猝灭剂F1 * S变体选择性探针(DEDIC)以测量AGP与两亲性胺(例如局麻药,抗心律失常药,抗抑郁药)的相关性。使用DEDIC作为探针,对局麻药的结构活性研究表明,药物疏水性与对F1 * S的亲和力之间呈正相关。通过检查可电离的局部麻醉药利多卡因的pH依赖性结合来评估静电因素的重要性。发现不带电荷的利多卡因结合的亲和力至少是其质子化对应物的八倍。虽然此结果与我们的模型一致(如果假设药物的氨基末端主要被门户中的带正电荷的残基静电排斥),但与当前发布的模型不一致,仅在模型的正电荷处存在负电荷区域。与阳离子配体良好相互作用的结合位点的碱基。 DEDIC-F1 * S缔合动力学使用停止流荧光法进行了研究,揭示了一个快速,不可解决的过程(tau <1毫秒),其EC50与在平衡实验中观察到的低亲和力结合和几个较慢的过程(tau = ca. 0.1至10秒)。如模型所示,由于与空间上不受阻碍的裂隙的结合应接近扩散受限,因此将低亲和力位点分配给裂隙区域。次快的组分表现出的表观速率在较高的[DEDIC]下达到饱和,这与模型预测的桶结合的两步机制一致:一旦预结合(门户)位饱和,桶进入便成为速率限制。因此,表观的高亲和力位点被鉴定为桶状位点。

著录项

  • 作者单位

    Harvard University.;

  • 授予单位 Harvard University.;
  • 学科 Biophysics General.; Health Sciences Pharmacy.
  • 学位 Ph.D.
  • 年度 2002
  • 页码 286 p.
  • 总页数 286
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 生物物理学;药剂学;
  • 关键词

  • 入库时间 2022-08-17 11:46:31

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