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In situ detection of Tbx 5 expression in developing embryonic chick heart.

机译:Tbx 5表达在发育中的雏鸡心脏中的原位检测。

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摘要

The Tbx 5 gene codes for a highly conserved transcription factor containing a DNA-binding motif called the T box (or T-domain). Tbx 5 is expressed in the posterior sinoatrial segment of the heart along with the developing forelimb buds. Mutations in Tbx 5 gene are associated with Holt Oram Syndrome (HOS), which is characterized by heart septal defects and forelimb abnormalities. Tbx 5 expression was examined during various stages of heart development in chick embryos using both a double stranded digoxygenin-labeled DNA probe and a single stranded digoxygenin-labeled anti-sense RNA probe (riboprobe). Due to the presence of homology in the Tbx family, bioinformatics tools were used to design primers targeting specifically the Tbx 5 transcript and not other Tbx family members. During the course of this project, we conducted eight sets of whole mount in situ hybridization studies. Various experimental parameters, including fixation conditions, hybridization stringency, and wash conditions, were studied thoroughly and optimizations were carried out. We also examined the effects of the type and concentration of the probe upon the signal strength. Our studies indicated intermediate levels of Tbx 5 expression in the inflow tract, with strong expression in the atrio-ventricular regions and left ventricular regions.
机译:Tbx 5基因编码一个高度保守的转录因子,该转录因子包含一个称为T盒(或T结构域)的DNA结合基序。 Tbx 5与发育中的前肢芽一起在心脏的后窦房段表达。 Tbx 5基因的突变与Holt Oram综合征(HOS)相关,其特征是心脏间隔缺损和前肢异常。在鸡胚胎的心脏发育的各个阶段中,都使用双链地高辛配基标记的DNA探针和单链地高辛配基标记的反义RNA探针(核糖核酸探针)检测了Tbx 5的表达。由于Tbx家族中存在同源性,因此使用生物信息学工具设计了专门针对Tbx 5转录本而不是其他Tbx家族成员的引物。在该项目的过程中,我们进行了八组完整的原位杂交研究。彻底研究了各种实验参数,包括固定条件,杂交严格性和洗涤条件,并进行了优化。我们还检查了探头类型和浓度对信号强度的影响。我们的研究表明流入通道中Tbx 5表达的中间水平,在房室区域和左心室区域中表达强烈。

著录项

  • 作者

    Agarwal, Vaishali.;

  • 作者单位

    San Jose State University.;

  • 授予单位 San Jose State University.;
  • 学科 Biology General.;Biology Genetics.;Biology Molecular.
  • 学位 M.S.
  • 年度 2010
  • 页码 102 p.
  • 总页数 102
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

  • 入库时间 2022-08-17 11:45:41

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