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Design and construction of a genetic clocked set-reset latch.

机译:基因时钟置位复位锁存器的设计和构建。

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摘要

The design and implementation of a synthetic genetic circuit analogous to a clocked Set-Reset latch is presented. The circuit consists of a pair of co-repressing transcription factors comprising a switch, and two input promoters used to change the state of the switch. The inputs are gated using terminator structures. The terminator activities are modulated by the intracellular level of an antitermination protein acting as the system clock. Deterministic and stochastic simulation models were used to predict the circuit's behaviour. The circuit was cloned into a pair of plasmids used to transform Escherichia coli bacteria. The circuit behaviour was monitored using the fluorescence signal from a green fluorescent protein that indicated the current latch state. Experimental characterization of the circuit did not confirm that the circuit met the design criteria. Plasmid copy number of the circuit was found to have a significant effect on latch state stability.
机译:提出了类似于时钟置位复位锁存器的合成遗传电路的设计和实现。该电路由包含开关的一对共抑制转录因子和两个用于改变开关状态的输入启动子组成。输入使用终结器结构进行选通。终止子的活性受到抗终止蛋白的细胞内水平的调节,而该蛋白是系统时钟。确定性和随机仿真模型用于预测电路的行为。该电路被克隆到用于转化大肠杆菌的一对质粒中。使用来自绿色荧光蛋白的荧光信号监视电路行为,该信号指示当前的锁存状态。电路的实验特性无法确认电路符合设计标准。发现电路的质粒拷贝数对锁存状态稳定性具有显着影响。

著录项

  • 作者

    MacIsaac, Kenzie Daniel.;

  • 作者单位

    University of Toronto (Canada).;

  • 授予单位 University of Toronto (Canada).;
  • 学科 Engineering Biomedical.
  • 学位 M.A.Sc.
  • 年度 2003
  • 页码 114 p.
  • 总页数 114
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 生物医学工程;
  • 关键词

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