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Estimation of black bear (Ursus americanus) abundance in the Northern Lower Peninsula of Michigan using microsatellite DNA markers.

机译:使用微卫星DNA标记估算密歇根州北部下半岛的黑熊(美洲熊)数量。

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摘要

The estimation of black bear population abundance has long been a difficult task, however valuable when justifying harvest quotas and managing populations. Recent advancements in molecular genetics have provided a means to identify bears using DNA contained in tissue and hair samples. We collected hair samples non-invasively using barbed wire hair snares and tissue samples from harvested bears to genetically identify individuals and estimate bear abundance in the Northern Lower Peninsula (NLP) of Michigan using a capture-recapture methodology. In both 2002 and 2003 we derived hair snare locations using a stratified random design and collected hair samples over a number of sampling intervals. As an additional sampling occasion we collected tissue samples from hunter harvested bears. We genetically analyzed hair and tissue samples with 5 microsatellite loci and quantified genotyping errors using samples from harvested bears. We estimated the population of yearling and adult black bears in the NLP with models that account for genotyping error to be 1,882 bears (95% CI 1,389--2,551 bears). We created a simulation model to quantify the effects of genotyping error and sub-sampling hair samples and found that genotyping error dramatically biases population estimates and the selection of 3 hair samples, when multiple hair samples were available, reduced the variance of population estimates.
机译:黑熊种群数量的估算长期以来一直是一项艰巨的任务,但是在证明收获配额和管理种群时非常有价值。分子遗传学的最新进展提供了一种利用组织和毛发样品中包含的DNA鉴定熊的方法。我们使用带刺铁丝网圈套器和从采集到的熊身上收集的组织样本以非侵入方式收集了头发样本,以进行基因鉴定,并使用捕获-捕获方法估算了密歇根州北部下半岛(NLP)的熊数量。在2002年和2003年,我们使用分层随机设计得出了头发圈套器的位置,并在多个采样间隔内收集了头发样本。作为额外的采样机会,我们从猎人收获的熊身上收集了组织样本。我们使用5个微卫星基因座对毛发和组织样本进行了遗传分析,并使用了采自熊的样本对基因分型错误进行了量化。我们使用模型(占基因分型错误的模型)来估计了NLP中一岁和成年黑熊的数量为1,882头(95%CI 1,389--2,551头)。我们创建了一个仿真模型来量化基因分型误差和二次采样头发样本的影响,发现基因分型误差极大地偏向了人口估计值,并且在有多个头发样本的情况下选择了3个头发样本,这降低了人口估计值的方差。

著录项

  • 作者

    Dreher, Brian P.;

  • 作者单位

    Michigan State University.;

  • 授予单位 Michigan State University.;
  • 学科 Biology Molecular.; Agriculture Forestry and Wildlife.
  • 学位 M.S.
  • 年度 2004
  • 页码 180 p.
  • 总页数 180
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 分子遗传学;森林生物学;
  • 关键词

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