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TexMol

机译:TexMol

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摘要

While molecular visualization software has advanced over the years, today, most tools still operate on individual molecular structures with limited facility to manipulate large multi-component complexes. We approach this problem by extending 3D image-based rendering via programmable graphics units, resulting in an order of magnitude speedup over traditional triangle-based rendering. By incorporating a biochemically sensitive level-of-detail hierarchy into our molecular representation, we communicate appropriate volume occupancy and shape while dramatically reducing the visual clutter that normally inhibits higher-level spatial comprehension. Our hierarchical, image based rendering also allows dynamically computed physical properties data (e.g. electrostatics potential) to be mapped onto the molecular surface, tying molecular structure to molecular function. Finally, we present another approach to interactive molecular exploration using volumetric and structural rendering in tandem to discover molecular properties that neither rendering mode alone could reveal. These visualization techniques are realized in a high-performance, interactive molecular exploration tool we call TexMol, short for Texture Molecular viewer.
机译:尽管分子可视化软件已经发展了许多年,但如今,大多数工具仍然只能在有限的条件下对单个分子结构进行操作,以操作大型多组分复合物。我们通过通过可编程图形单元扩展基于3D图像的渲染来解决此问题,从而导致比传统的基于三角形的渲染快一个数量级。通过将生物化学敏感的详细程度层次结构整合到我们的分子表示中,我们可以传达适当的体积占有率和形状,同时显着减少通常会抑制较高级别的空间理解的视觉混乱。我们基于图像的分层渲染还允许将动态计算的物理特性数据(例如静电势)映射到分子表面,从而将分子结构与分子功能联系起来。最后,我们提出了使用体积和结构渲染串联的另一种交互式分子探索方法,以发现单独的渲染模式都无法揭示的分子特性。这些可视化技术是在一种称为“ TexMol”的高性能交互式分子探索工具中实现的,该工具是“ Texture Molecular Viewer”的缩写。

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