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Bacteriophage fd: exactly how flexible?

机译:噬菌体FD:究竟是多么灵活?

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The particles from filamentous bacteriophages are generally considered to be flexible. This assumption originally arose from the observation of electron micrographs where the virions appeared as long and randomly bent filaments. How accurately does this aspect of filamentous viruses represent the behaviour in solution? While the conditions of microscopic experimentation are very different from those of solution or the natural environment, other observations may correspond to more rigid particles. Hydrodynamical measurements are a help to ascertain the actual degree of flexibility of these particles in the more real three dimensional solution conditions. Employing sedimentation equilibrium and sedimentation velocity data for bacteriophage fd, and mathematical modelling, we explore the behaviour of these particles here. The relative insensitivity of the data pair (sedimentation coefficient–translational diffusion coefficient) so obtained is confirmed and the superiority of the conformational information contained in other parameters, such as the rotational diffusion coefficient and the intrinsic viscosity. Despite this lack of sensitivity, the straighter model conformations satisfy better the experimental data, which can be an indication of a relatively rigid viral particle.
机译:来自丝状噬菌体的颗粒通常被认为是柔性的。这种假设最初是从电子显微照片的观察到,其中病毒群似乎长而随机弯曲的长丝。这种丝状病毒的这一方面有多准确地代表解决方案中的行为?虽然微观实验的条件与溶液或自然环境的条件截然不同,但是其他观察结果可以对应于更刚性的颗粒。流体动力测量是一种有助于确定这些颗粒在更真实的三维溶液条件下这些颗粒的实际灵活性程度。使用沉积平衡和沉降速度数据进行噬菌体FD,以及数学建模,我们在此探讨这些颗粒的行为。如此获得的数据对(沉降系数-平移扩散系数)的相对不敏感性被确认并且包含在其它参数,如旋转扩散系数和特性粘度的构象信息的优越性。尽管缺乏灵敏度,但更直的模型构象满足了更好的实验数据,这可以是相对刚性病毒颗粒的指示。

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