首页> 外文会议>Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009 >Proteome Characteristic Pattern Study of Unstable Angina with Blood Stasis Symptom Based on Least Angle Regression Algorithm
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Proteome Characteristic Pattern Study of Unstable Angina with Blood Stasis Symptom Based on Least Angle Regression Algorithm

机译:基于最小角度回归算法的血瘀证不稳定型心绞痛的蛋白质组学特征模式研究

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The aim of this study was to analyze the proteome characteristic pattern of unstable angina with blood stasis symptom. Plasma samples were obtained from twelve unstable angina patients and twelve healthy volunteers. To remove the six most abundant proteins, a polyclonal antibody affinity column was used. Then, the two classes of samples were separated by 2D- DIGE. The differentially expressed protein spots were selected and identified with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) or MS-MS. In the end, using least angle regression algorithm, we studied the proteome characteristic pattern of unstable angina with blood stasis symptom. There are significant difference between unstable angina patients and healthy volunteers. The seventeen proteins made pattern could distinguish unstable angina with qi deficiency and blood stasis syndrome patients from the healthy people and it is probably the proteome characteristic pattern of unstable angina patients with qi deficiency and blood stasis syndrome; The twelve proteins made pattern could distinguish unstable angina with intermingled phlegm and blood stasis syndrome patients from the healthy people and it is probably the proteome characteristic pattern of unstable angina patients with intermingled phlegm and blood stasis syndrome. Using the seventeen proteins made pattern, the unstable angina with qi deficiency and blood stasis syndrome diagnosis accuracy could reach 100 % . Using the twelve proteins made pattern, the unstable angina with intermingled phlegm and blood stasis syndrome diagnosis accuracy also could reach 100%. The least angle regression may be a suitable data mining method for the discovery of illness diagnosis pattern.
机译:这项研究的目的是分析具有血瘀症状的不稳定型心绞痛的蛋白质组特征模式。从十二名不稳定型心绞痛患者和十二名健康志愿者获得血浆样品。为了除去六个最丰富的蛋白质,使用了多克隆抗体亲和柱。然后,将两类样品用2D-DIGE分离。选择差异表达的蛋白质斑点,并通过基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF-MS)或MS-MS进行鉴定。最后,使用最小角度回归算法,研究了具有血瘀症状的不稳定型心绞痛的蛋白质组特征模式。不稳定型心绞痛患者与健康志愿者之间存在显着差异。 17种蛋白质制成的模式可以将气虚血瘀证的不稳定型心绞痛与健康人区分开,这可能是气虚血瘀证的不稳定型心绞痛患者的蛋白质组学特征模式。十二种蛋白质组成的模式可以区分痰湿瘀证的不稳定型心绞痛与健康人,这可能是痰湿瘀证的不稳定型心绞痛的蛋白质组学特征。用十七种蛋白质制作的模式,气虚血瘀证的不稳定型心绞痛的诊断准确率可达100%。使用十二种蛋白质制成的模式,不稳定的心绞痛与痰,血瘀证混合诊断的准确性也可以达到100%。最小角度回归可以是用于发现疾病诊断模式的合适的数据挖掘方法。

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