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Implementation of Dynamic Density Functional Theory for Self-Organizing Complex Fluids on Parallel Computers

机译:动态密度泛函理论在并行计算机上自组织复杂流体的实现

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摘要

In this paper we elaborate on a new method for the calculation of diffusional relaxation mechanisms in complex self-organizing fluids on a mesoscopic level. The applications are in the development and design of industrial polymer and surfactant materials, and also in the understanding of active biological fluids for biotechnology applications. The method entails repeated inversion of a highly non-linear density functional transform. The problem is gargantuan: O(10~4 - 10~6) nonlinear equations have to be solved each of the O(10~5 - 10~6) time steps. However, simulations of practical interest can be done, using the parallel computer CM5. The data-parallel language CM Fortran is well suited for rapid implementation of the numerical algorithms. Conversion of the CM Fortran code to more general F90 (IBM) is demonstrated. The foremost technical bottlenecks are the efficient implementations of (ⅰ) a generalised fully symmetric finite difference operator, (ⅱ) the implementation of an efficient multi-component random isotropic flux generator and (ⅲ) the implementation of a preconditioner for solving the non-linear equations.
机译:在本文中,我们阐述了一种在介观水平上计算复杂自组织流体中扩散弛豫机理的新方法。该应用程序用于工业聚合物和表面活性剂材料的开发和设计,还用于生物技术应用中的活性生物流体的理解。该方法需要对高度非线性密度函数变换进行反复反演。问题是巨大的:每个O(10〜5-10〜6)时间步长都必须求解O(10〜4-10〜6)非线性方程。但是,可以使用并行计算机CM5进行具有实际意义的模拟。数据并行语言CM Fortran非常适合快速实施数值算法。演示了CM Fortran代码到更通用的F90(IBM)的转换。最主要的技术瓶颈是(ⅰ)广义的完全对称有限差分算子的有效实现,(ⅱ)有效的多分量随机各向同性通量生成器的实现以及(for)求解非线性的前置条件的实现方程。

著录项

  • 来源
  • 会议地点 Milan(IT);Milan(IT)
  • 作者

    J.G.E.M. Fraaije; O.A. Evers;

  • 作者单位

    Laboratory of Biophysical Chemistry, University of Groningen, Nijenborgh 4 9747 AG Groningen, The Netherlands;

    BASF, Zentralbereich Informatik, ZXT-Informatik-Technologie D-6700 Ludwigshafen, Germany;

  • 会议组织
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 TQ4;
  • 关键词

  • 入库时间 2022-08-26 13:57:35

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