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Biochemical composition of particles shape particle-attached bacterial community structure in a high Arctic fjord

机译:北极高峡湾中颗粒的生物化学组成影响颗粒附着的细菌群落结构

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摘要

Kongsfjorden, a high Arctic fjord was used as a model site to test the hypothesis that source and biochemical composition of particulate organic matter (POM) exert strong selective pressure on particle-attached bacterial community than their free-living counter parts. For this subsurface water samples were collected along the particle density gradient in Kongfjorden. Microbial communities were size fractionated into free-living (FL, 0.2-3 mu m) and particle-attached (PA, 3 mu m), and V3-V4 16S rRNA gene amplicon sequencing was used for evaluating bacterial community composition. Further, elemental (C/N), isotopic (delta C-13) and biochemical composition (carbohydrates, proteins and lipids) of POM were also determined. Clear niche segregation among PA and FL communities was observed, except at a location close to Open Ocean. Higher alpha diversity was recorded in majority of the PA communities as compared to the FL. delta C-13 (parts per thousand) and particulate-carbohydrate (PCHO) content of POM strongly influence PA bacterial community composition, which was composed primarily of complex biopolymers/carbohydrates degrading bacterial taxa, in particular members of phyla Verrucomicrobia and Bacteroidetes. In addition, glacial meltwater influx and particulate organic carbon (POC) influence FL bacterial community structure. Thus, it appears that particles act as direct substrates for bacterial utilization and select particle-attached bacterial community with specific structure and function while dissolved organic carbon (DOC) plume around the particles select for some specialized free-living bacteria. Further, our results suggest that PA bacterial community can act as ecological indicator for the availability and turnover of complex polymeric substrates in high Arctic fjord environment.
机译:北极峡湾的高斯峡湾(Kongsfjorden)被用作模型场所,以检验以下假设的假设:颗粒有机物(POM)的来源和生化成分对附着于颗粒的细菌群落比其自由活动的对应部分施加更大的选择压力。为此,沿Kongfjorden的颗粒密度梯度收集了水样。将微生物群落大小分为自由生活区(FL,0.2-3微米)和附着颗粒(PA,> 3微米),并使用V3-V4 16S rRNA基因扩增子测序来评估细菌群落组成。此外,还确定了POM的元素(C / N),同位素(δC-13)和生化成分(碳水化合物,蛋白质和脂质)。除了在靠近大洋的位置外,还观察到了PA和FL群落之间明显的生态位隔离。与FL相比,大多数PA社区记录到更高的alpha多样性。 POM的δC-13(千分率)和微粒碳水化合物(PCHO)含量强烈影响PA细菌群落组成,其主要由降解细菌类群的复杂生物聚合物/碳水化合物组成,尤其是Verrucomicrobia和Bacteroidetes成员。此外,冰川融水涌入和有机碳颗粒(POC)影响FL细菌群落结构。因此,似乎颗粒充当细菌利用的直接底物,并选择具有特定结构和功能的附着颗粒的细菌群落,而颗粒周围的溶解有机碳(DOC)羽流则选择一些专门的自由生存细菌。此外,我们的结果表明,PA细菌群落可以作为生态学指标,用于在北极高峡湾环境中复杂的聚合物基质的可用性和周转率。

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