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首页> 外文期刊>Journal of Clinical Microbiology >Development and Validation of a Laboratory-Developed Multiplex Real-Time PCR Assay on the BD Max System for Detection of Herpes Simplex Virus and Varicella-Zoster Virus DNA in Various Clinical Specimens
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Development and Validation of a Laboratory-Developed Multiplex Real-Time PCR Assay on the BD Max System for Detection of Herpes Simplex Virus and Varicella-Zoster Virus DNA in Various Clinical Specimens

机译:用于检测各种临床标本中的单纯疱疹病毒和水痘-带状疱疹病毒DNA的BD Max系统的实验室实时多重PCR检测的开发和验证

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A multiplex real-time PCR (quantitative PCR [qPCR]) assay detecting herpes simplex virus (HSV) and varicella-zoster virus (VZV) DNA together with an internal control was developed on the BD Max platform combining automated DNA extraction and an open amplification procedure. Its performance was compared to those of PCR assays routinely used in the laboratory, namely, a laboratory-developed test for HSV DNA on the LightCycler instrument and a test using a commercial master mix for VZV DNA on the ABI7500fast system. Using a pool of negative cerebrospinal fluid (CSF) samples spiked with either calibrated controls for HSV-1 and VZV or dilutions of a clinical strain that was previously quantified for HSV-2, the empirical limit of detection of the BD Max assay was 195.65, 91.80, and 414.07 copies/ml for HSV-1, HSV-2, and VZV, respectively. All the samples from HSV and VZV DNA quality control panels (Quality Control for Molecular Diagnostics [QCMD], 2013, Glasgow, United Kingdom) were correctly identified by the BD Max assay. From 180 clinical specimens of various origins, 2 CSF samples were found invalid by the BD Max assay due to the absence of detection of the internal control; a concordance of 100% was observed between the BD Max assay and the corresponding routine tests. The BD Max assay detected the PCR signal 3 to 4 cycles earlier than did the routine methods. With results available within 2 h on a wide range of specimens, this sensitive and fully automated PCR assay exhibited the qualities required for detecting simultaneously HSV and VZV DNA on a routine basis.
机译:在BD Max平台上开发了检测实时单纯疱疹病毒(HSV)和水痘带状疱疹病毒(VZV)DNA以及内部对照的多重实时PCR(定量PCR [qPCR])分析方法,该方法结合了自动DNA提取和开放式扩增功能程序。将其性能与实验室常规使用的PCR分析(即,在LightCycler仪器上由实验室开发的HSV DNA测试和在ABI7500fast系统上使用商业预混液对VZV DNA的测试)进行了比较。使用一组掺有HSV-1和VZV校准对照或先前已量化HSV-2的临床菌株稀释液的阴性脑脊液(CSF)样品,BD Max分析的经验限为195.65, HSV-1,HSV-2和VZV分别为91.80和414.07拷贝/ ml。通过BD Max分析正确鉴定了HSV和VZV DNA质量控制小组(分子诊断质量控制[QCMD],2013,英国格拉斯哥)的所有样品。从180个不同来源的临床标本中,由于没有检测到内部对照,通过BD Max测定法发现2个CSF样品无效;在BD Max分析与相应的常规测试之间观察到100%的一致性。 BD Max分析比常规方法早3至4个循环检测到PCR信号。该灵敏且全自动的PCR检测方法可在2 h内对多种标本进行检测,显示出常规检测HSV和VZV DNA所需的质量。

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